Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1685 ATGGATGAAGGTGAGGGAGGATACGGTGAGAGTGGGGATCCGATGGATCAGTTCCATCGCAACGAAGCAATATCAGCTGTAGCTGATGATGGTTTCTTGGCTGAGGAAGACGACGATTACGAGGACCTTTACAACGATGTTAATGTTGGGGAAGGGTTTCTTCAGTCTCTGAGGAAGAACGAGGATTCAGGGTTTCGGAATGAGGTGGTTGAGGAGAAAAAGCCCCAATCAGTCGCTGTGCCTCCAGAAACTGGTGCTGTTTCTATCCCAGGTGTCGGTGTCGGCGGCGGTAGCGGTACTGGTGGTGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGGAGGTGGATTTGGGGTTATGGATGCTGCATCCAGGGTTCCAGGGAGAGCAGATGGGATTCAAAATCAGGGGTTTAGAGGGAATGAGATGGGTGTGAAAGGTAGTGGTGGATCGGGTAGCTCTATGGGTGGTGGAGGTGGGATGAGGGTTGAATTAGGGCAGCCACCGGGTAAGTTGAATGAGATAGAGGAGCAGAGTGCTAATAATAGCGTAGGAGTACAAGGGATGGGGCAGCAACCTCATGGTGGAGTTGTTGGGAATGTGGGGACTGTGGGAAATGAGAATTTGATGAGGCAAGGTGGTGGAGGAGGAAATCTCAATAGGACTGGCGGCAATGGGGTTGGGAATAGTGTGAGTGGTGCCAATATTGTTAATACTGGAGGAGGAGCTACTGTTGTGGGTGGCGGCGGCACTGGAAGTGGTGGTGGTGGGGGCACCATATTATTTGTGGGTGATCTGCACTGGTGGACTACTGATGCTGAATTGGAGGCAGAACTTTGTAAGTATGGTCCAGTGAAGGAGGTGAAGTTTTTTGATGAGAAGGCTAGTGGGAAGTCAAAAGGGTATTGCCAGGTTGAGTTTTATGAGCCGTCTGCTGCATCTGCTTGTAAGGAAGGGATGAATGGCCATATGTTTAATGGGCGACCATGTGTTGTTGCTTTTGCTTCACCTTTTACCGTTAAGAGAATGGGAGAGGCTCAGGTGAATAGGAATCAACAGATGGCCCAATCTACAGTTTCTCAGACAAGGAGGGGGCCTGCTGATGCCGGGGCTAAGACAGGTGGGAGTAACATTACGACTGGTGGAAACTACCAAGGTGGAGATGGCAACCGAGGCTATGGGAGAGGTAACTGGGGAAGAGGGAATAATCCTGGGATGGGAAATAGGGGCCCTGTTAATCCAATGAGGAATAGGGGTGGTGGGATGGGTGGTAGAGGTATAATGGGTAATGGTGGGAATGGATTTGGCCAGGGTATTGGTGCTACCCCACCTCTGTTGCATCCTCAATCAATGATGAATCAGGGTTTTGATCCTGCATTTGGTGGTCCTATGGGTAGAATGGGTGGCTATGGTGGCTTTCCAGGTGCTCCAACGCCCCCATTCTCTGGGATTTTGCCTTCATTCCCTGCTGTTGGAGGTGTTGGTTTGCCTGGAGTAGCACCTCATGTTAATCCAGCATTTTTTGGAAGAGGAATGCCCATGAATGGTATGGGGATGATGCCCACATCAGGAGTTGATGGGCCTAATATGGGAATGTGGTCGGATCCAAGTATGGGGGGATGGGGTGGTGAAGAGCCTGGTGGTGGGAGAGCTGGAGAGTCAAGTTATGGGGAGGAAGCTGCATCAGAACATCAGTACGGTGAGGTGAGTCATGATAGAGGTGGTTGGCCTAATGCCATGAGGGAAAAAGATAGAGGATCAGAAAGGGATTGGTCTGGTTCTTCTGAACGAAGGTACAGGGATGATAGAGATCAAGGATATGAAAGAGATGCGCCTAGAGAGAAAGACATGGGCCAAGACCATGAATGGTCTGAAAGAAGACATCGTGATGACAGAGAAATAGGGCGTGAACGTGACAGGGACCGTGATCGTGATCGGGAGCGGTCTCGAGACCGTGATCGTGACCGTGACCGTGAAAGGGAGCGTGAGAGAGACCGTGAGCGTGACAGGTACAAGGAAGACAGGGACAGATATGCAGACCATCACAGGTACAGGGATCGTGAAGTGGACCATGAGGATGAGTGGGATCGGGGGCGGTCATCAAGGACTCACAGCAAATCACGATTATCACAAGAGGAGGATCATCATTCTAGATCTAGGGATGCTGATTATGGCAAGAGGAGACGGCTTACGTCTGAGTAA 2199 0.5093 MDEGEGGYGESGDPMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNVGEGFLQSLRKNEDSGFRNEVVEEKKPQSVAVPPETGAVSIPGVGVGGGSGTGGEAAAAAAAAAGGGFGVMDAASRVPGRADGIQNQGFRGNEMGVKGSGGSGSSMGGGGGMRVELGQPPGKLNEIEEQSANNSVGVQGMGQQPHGGVVGNVGTVGNENLMRQGGGGGNLNRTGGNGVGNSVSGANIVNTGGGATVVGGGGTGSGGGGGTILFVGDLHWWTTDAELEAELCKYGPVKEVKFFDEKASGKSKGYCQVEFYEPSAASACKEGMNGHMFNGRPCVVAFASPFTVKRMGEAQVNRNQQMAQSTVSQTRRGPADAGAKTGGSNITTGGNYQGGDGNRGYGRGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPAVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEPGGGRAGESSYGEEAASEHQYGEVSHDRGGWPNAMREKDRGSERDWSGSSERRYRDDRDQGYERDAPREKDMGQDHEWSERRHRDDREIGRERDRDRDRDRERSRDRDRDRDRERERERDRERDRYKEDRDRYADHHRYRDREVDHEDEWDRGRSSRTHSKSRLSQEEDHHSRSRDADYGKRRRLTSE 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1685 732 SMART rrm1_1 259 332 IPR000504 GO:0003723
Dere04g1685 732 MobiDBLite consensus disorder prediction 1 21 - -
Dere04g1685 732 MobiDBLite consensus disorder prediction 349 363 - -
Dere04g1685 732 CDD RRM_CFIm68_CFIm59 260 333 - -
Dere04g1685 732 MobiDBLite consensus disorder prediction 563 732 - -
Dere04g1685 732 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 260 329 IPR000504 GO:0003723
Dere04g1685 732 MobiDBLite consensus disorder prediction 349 410 - -
Dere04g1685 732 Gene3D - 254 376 IPR012677 -
Dere04g1685 732 SUPERFAMILY RNA-binding domain, RBD 256 344 IPR035979 GO:0003676
Dere04g1685 732 MobiDBLite consensus disorder prediction 525 732 - -
Dere04g1685 732 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 258 336 IPR000504 GO:0003723
Dere04g1685 732 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 224 670 IPR034772 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1685 04 18908775 18910973 Dere04g1685 04 18908775 18910973 ECH