Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1621 ATGGCCCCAAAGGGAGACAATAATGTTGCAGTGTCTAATATGGAGTTGGAGAGATTGCTTAGCATGAAAGGTGGGAAAGGAGAAGCAAGCTATGCCAACAATTCCCAAGCTCAGGCCAGACATGCTAGGTCTGTGCTTCACCTTCTCAAAGAAACCCTAGACACAGTTCACCTTGATGATAACTCTACTATCCCATTTACAGTTGTGGATTTGGGATGTTCATGTGGCAGCAACACCATCGATACAATGGATGTGATCATCAAGCACATCATCAAGCGGTACAAGGCTTTAGGCTTTGTGCCACCGGAGTTTTCTGCATTTTTCTCCGATCTTCCTAGTAACGACTTCAATACCCTCTTCCAGTTGTTTCCTCCACTACTGATCAACTATGGCGGTGGTGTTAGCATGGAAGAATGCCTTGCTGCCAACAACCATCGGTCCTACTTCGTCGCCGGAGTTCCTGGCTCCTTTTATCGTAGACTTTTTCCGGCAAGGAGCATCAATTTCTTTTATTCAGCCTTTTCTCTCCATTGGTTATCACAGTTGCCGGAGAGTGTGGGGGACAAGAGTTCAAAAGCATACAACAAAGGGAAGGTGTTCATACAAGGAGCAAGTGAGAGCACAGCTAACGCATACAAGAGACAGTTCCAAACAGACTTGGCTAGCTTTCTTAAGTGTAGATCTATTGAGATGAAGAAAGGTGGGTCCATGTTCTTGGTTTGCTTGGGTAGGATCTCACTGGACCCCACTGACCAGGGTGGGCCCGGCCTCCTCTTTGGTACCCATTTTCAAGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCAGTGAGAAACGAGACAACTTTAACATTCCTCTTTATGCATCGAGCTTGCAAGACTTCAAGCAGGTGGTAGAAGCCAATGGCTCATTTGTCATAAACAAGCTTGAGGTGTTCAAAGGAGGAAGCCCACTTGTGGTGAGCCATCCAGAAGATGAAGCCGAGGTGGGCAAGGCTCTAGCCAACAGCTGCAGGAGTGTGTCTGGAGTCCTTGTTGATGCCCACATTGGTGACCACCTCAGCGACGAGCTGTTTTCAAGAGTGGCGCGCCGAGCCACGAGCCACGCCAAAGAACTGCTGGAGAAACTTCAGTTTTTTCATATTGTTGCATCCCTTTCCTTTGCTTAA 1173 0.4731 MAPKGDNNVAVSNMELERLLSMKGGKGEASYANNSQAQARHARSVLHLLKETLDTVHLDDNSTIPFTVVDLGCSCGSNTIDTMDVIIKHIIKRYKALGFVPPEFSAFFSDLPSNDFNTLFQLFPPLLINYGGGVSMEECLAANNHRSYFVAGVPGSFYRRLFPARSINFFYSAFSLHWLSQLPESVGDKSSKAYNKGKVFIQGASESTANAYKRQFQTDLASFLKCRSIEMKKGGSMFLVCLGRISLDPTDQGGPGLLFGTHFQDAWDDLVQEGLISSEKRDNFNIPLYASSLQDFKQVVEANGSFVINKLEVFKGGSPLVVSHPEDEAEVGKALANSCRSVSGVLVDAHIGDHLSDELFSRVARRATSHAKELLEKLQFFHIVASLSFA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1621 390 Pfam SAM dependent carboxyl methyltransferase 54 387 IPR005299 GO:0008168
Dere04g1621 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 388 IPR029063 -
Dere04g1621 390 Gene3D Vaccinia Virus protein VP39 34 317 IPR029063 -
Dere04g1621 390 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 21 371 IPR005299 GO:0008168
Dere04g1621 390 Gene3D - 20 372 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1621 Dere-ChrDere04 18226904 18230044 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1621 04 18226904 18230044 Dere04g1621 04 18226904 18230044 ECH