Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1616 ATGTTGCCCATAGCGGATTTAGAGTTGGGTTTAGCTGTAACTTCAATGGCAGTGACAGATGCTCAAAATCCTCTTCTTGGAGATACCACCTGTGGTTCCTTGTTACAGAAACTACAGGAAATATGGGATGAGGTTGGAGAGAATGATGAGGATCGAGACAAGATGCTTCTTCAGTTAGAACAGGAATGCTTGGATGTGTACAAGAGAAAGGTTGAGCAGGCTGCAAAGTCAAGGGCACAGCTACTTCAAGCTTTATCTGATGCTAAACTTGAGCTTTCTAGTCTTCAATCAGCACTAGGAGAAAAGAGCTATGCTGGAATTCCTGAAAACACTTCTGGAACCATCAAGGAACAACTTGCTGCTATAGCGCCAATACTCAAACAGTTATGGGAGCAAAAGGAGGAGAGAATAAAGGAATTTTCAGACGTACAGTCACAGATCCAAAAAATATGTGGAGAAATAGCTGGGAGCCTGAGCCTTGCTGATCAAACAGGAACACCTGCAGTTGATGAATCTGACCTGTCTCTGAAAAAGTTGGATGAATATCAATCTCAACTCCAAGAACTTCAAAAGGAGAAGAGTGAGAGGTTGCACAAAGTTCTTGAATTTGTGAGTACAGTGCATGATCTTTGTGCTGTCCTTGGGATGGACTTCTTCAGTACTGTAACTGAGGTTCATCCAAGCTTAAATGATTCTACTGGTGTTCAATCCAAAAGCATCAGCAATGACACCCTAGCTAGACTGGCCAAGACAGTCTTAACACTCAAAGAAGATAAAAAGCAGAGACTGCACAAGCTCCAAGAATTAGCTTCTCAGTTAATTGATCTGTGGAATTTAATGGATACACCTGTAGAAGAAAGGAGATTATTCGACCATGTTACCTGTAATATGTCAGCTACTGTGGATGAAGTCACTGTTCCTGGGGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAACGGCTTGATCAGCTGAAAGCCAGCAGGATGAAGGAAATTGCTTTCAAGAAGCAAGGAGAACTTGAAGAGATATTTACCCGTGCTCATGTAGAAATAGATCCTGAAGCTGCTCGAGAGAAAATCATGGCACTGATTGATTCTGGAAATATTGAACCGGCTGAATTACTGGCTGACATGGACAATCAAATAGCAAAAGCCAAAGAAGAAGCTTTAAGCCGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGGTATAATGCAAGCAGAGGTGCACACTTGAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAACAAAATTCCAGCATTGGTTGACACATTGGTTGCCAAAACTCGTGCATGGGAAGAAGATCATGGCATATCATTCACATACGATGGTGTTCCTCTTCTTGCCATGTTAGAAGAATATGCCATGCTTAGGCATGAACGCGAAGAGGAGAAACGCAGGTTGAGGGACCAGAAGAAGTATCACGAGCAGCAAAACACAGAACAGGAAGCCATATTTGGTTCAAGACCCAGCCCTGCTCGGCCAGTGTCTGTTGGCAGCAAGAAGATAGTTGGACCTCGTTCTAATGGAGGAGCCAATGGTACTCCTAACCGACGGCTATCTCTCAATGCTCATCAGAATGGATCACGGTCCACCACTAAAGAAGGGAAAAGAGATAATAATAATAGACCAGTTGCTCCAGTGAATTACGTAGCCATATCGAAAGATGATGCTGCTTCCCATGTTTCTGGTGGCGATCCAGTCCCGGCTTCGCCCTAA 1812 0.4365 MLPIADLELGLAVTSMAVTDAQNPLLGDTTCGSLLQKLQEIWDEVGENDEDRDKMLLQLEQECLDVYKRKVEQAAKSRAQLLQALSDAKLELSSLQSALGEKSYAGIPENTSGTIKEQLAAIAPILKQLWEQKEERIKEFSDVQSQIQKICGEIAGSLSLADQTGTPAVDESDLSLKKLDEYQSQLQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLTLKEDKKQRLHKLQELASQLIDLWNLMDTPVEERRLFDHVTCNMSATVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQGELEEIFTRAHVEIDPEAAREKIMALIDSGNIEPAELLADMDNQIAKAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEDHGISFTYDGVPLLAMLEEYAMLRHEREEEKRRLRDQKKYHEQQNTEQEAIFGSRPSPARPVSVGSKKIVGPRSNGGANGTPNRRLSLNAHQNGSRSTTKEGKRDNNNRPVAPVNYVAISKDDAASHVSGGDPVPASP 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1616 603 Coils Coil 256 276 - -
Dere04g1616 603 MobiDBLite consensus disorder prediction 493 510 - -
Dere04g1616 603 FunFam 65-kDa microtubule-associated protein 6 386 519 - -
Dere04g1616 603 Coils Coil 64 98 - -
Dere04g1616 603 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 28 590 IPR007145 GO:0000226|GO:0008017
Dere04g1616 603 Coils Coil 172 199 - -
Dere04g1616 603 MobiDBLite consensus disorder prediction 493 603 - -
Dere04g1616 603 MobiDBLite consensus disorder prediction 541 561 - -
Dere04g1616 603 Coils Coil 315 335 - -
Dere04g1616 603 Coils Coil 478 509 - -
Dere04g1616 603 Gene3D - 385 519 - -
Dere04g1616 603 Pfam Microtubule associated protein (MAP65/ASE1 family) 33 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1616 Dere-ChrDere04 18179806 18183315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1616 28 563 EF-hand Containing Proteins AT5G62250 42.125 5.60e-124 375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1616 04 18179806 18183315 Dere04g1616 04 18179806 18183315 ECH