Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1568 ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGCCCGTCCAAGGCGTTTCTGGCTCACCGCTCCGGCGAATCTCCGGCCCCCGCGCAACCCGACCTCCGCCGCAGCCTCCGCCGCCGGAATGTGAGGTACAACATCGATTATGACGACTACCTGGATGAGGACGACGAAGAAGAGGAGGAGGACGAGAGGAGGAGGGAGAAGAAGCTGAAGCTAGTGGTGAAGCTGAACCAGGATAGGGATAGGGACGAAGACGAGTCGGCGCCCAACCGCACGCGCGCCGGGGCGCGTGAGGAGCACTCGCGGGATTCTTCCGAGGATGAGGGCGAGAGGAAGCCCCTGAAGAAGAGGAAGATCAGCGGCGGCAGGTGTGGAAATGAAGATGGCGAGGAGGAAGAGGAAGATGGAGGGGTTGATAATGATGAAGAAAACGAGAACGACGAAGATGAGAATCTTCATGACAATAATGATGATGATGATGATGATGATGAAGGCGTGGTAAAAGGCAGAAAAGTGGATTCGAAAGGGCTCCACTCTGTTTCAGGGACTCCGAGAAAATCTGCATCTGGGATTCCATTGCCTGATAAGAGGACTCTGGAGTTGATCCTCGACAAGCTTCAGAAGAAGGACACATATGGTGTGTATGCAGAGCCGGTTGATCCAGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCAATGGACTTTGCCACAGTGCGGAAGAAGCTAGCAAATGGATCATATCCTACCTTGGAACAATTTGAGAGTGATGTTTATTTAATTTGCTCAAATGCAATGCAATACAATTCACCAGACACTATATACCACAAACAGGCACGATCAATACAAGAATTAGCACGGAAGAAGTTTGAGAAGTTAAGGATTGACTTTGAACACTCTCAAAGTGAGCTGAAGTCAGAACAAAAAACAAGACTAAATTCATTGGTCAAGAAGCAGGCAAAGAAGCCAGTTGGTCGTGCCTCACAGGAACCTGTTGGCTCTGATTTCTCTGCGGGTGCAACTCTTGCTAATATTGGAGATGTTTTGCCAACTACCCACCCAATCCAGGGTGGCAGCTGTGAGAGGCCTTGCAACAATGATGGCCTTGCGGAGGGTAATGCTTTCTTAATTGATGCAAATCAAGATAAAGCAGAAGAATTTTTATCAGGGAAGAGCCAGCTTTCTAAGATGGGAAGAAAGCCATTTGCTCTTGATGAGAATCGTCGTGCAACTTATAATGTTTCTCTTCAACCAGTTGCCAAATCAGATTCAGTATTTATGACATTTGAGAGTGAAATTAAGCAGCTGGTGACCGTTGGGCTTCATGCTGAATATTCCTATGCTAGGAGTTTAGCTCGTTTTGCTGCAACTCTAGGACCTGTTGCTTGGAAAATTGCTTCGCAAAGGATTCAGCAGGCACTACCAGCTGGCTGTAAATTTGGTCATGGTTGGGTTGGAGAGTATGAACCACTACCCACACCAGTATTAATGCTTGATAATCGTGTCCAAAAAGAACCTAGTTTTATTTCAAAGTCTCGGTCTAATACTGAATTAATTAAGGGTGACAAAAATGGTAAGATTCCAGAATCCTCCATGGAACATCATGTTCACAGACTGATGTTAGAGGGAAAACAGCCTTCGGTTGATCCTGCCAGTGGACTTACATCAGAAGGAAAACCATCTTTGTTTGGTTCTGCTGGAATAAGACCCAGTACTCCTGTCAGTGTACTTTATCAGCAACAGAATGTTCAGTCCAGGCGCTCTGGCAAGCGTGAGAATAAGGGTTTGAAACAAGTGGAGTCGAACTCTTTGCCCTCCAGTAATCAGAATGATGCTGGTCTTAGTGCTAAGTTTTCTAGTAATGCCCCTACAGGAGTGTCTAAGCCTAGAGAGATGGTACCTAGGAACATGAATATATTGCCACCTATACCTTTCAAGGAGCCAGATACTAATGGAGTTGCAAGTGGAGATTTACCTAATGGTAAAGTCACAAATTCCAGTTTGAATAGACGGTCGACTGGTCCACCCTCTGAAAGTTCTTCAAATCAAGCTGGTAGAGCTGCTCCCTTTGTTTCACATGGGCAAGATCAGAGTCTTACTGACCCAGTTCAGCTGATGAGGATGTTAGCCGAAAAGGCTCAAAAGCAACAAACTTCTAATCCTTCTCCAGTTGAAACCCCTCCTGTGACACCATCAGTTCCTTCAGGACGGAGAGATGACTTGAGCAATGCAGCTGCAGCAGCTGCCCGTGCATGGATGTCTGTGGGAGCAGGTGGATTTAAACAAGGACCTGATAATTCTAGTTCACCTAAAAGCCAGATTTCTGCAGATTCTTTGTACAACCCATCGCGAGAGTTCCATCAGCACATTCCACGAACCAGGGGGGAGTTTCCTTCTGGTGGAATGCCTTTCCAGTCTGAGAAAAACAATTTTCCATTTCAGGCACTAGTATCTCAACCTATTCACCCAGGTGGCGTTTCACAGTTTCCAAACCGATCTATGGTTTTCCCTCAATTAGCAGCCACTGATCTGTCCAGATTTCCAATGCAGCCTGCTTGGCAAGGTCTTGGTCCGCATGGTCAACCAAGGCAGAAGCCCGAAACACTTCCACCTGACTTGAATATTGGTTTCCAATCTCCAGGGTCGCCTGCAAAACAATCTTCTGGTGTGATGGTTGACTCTCAGCAACCAGACCTGGCTTTGCAATTATGA 2715 0.4681 MGQIVRRKKKGRPSKAFLAHRSGESPAPAQPDLRRSLRRRNVRYNIDYDDYLDEDDEEEEEDERRREKKLKLVVKLNQDRDRDEDESAPNRTRAGAREEHSRDSSEDEGERKPLKKRKISGGRCGNEDGEEEEEDGGVDNDEENENDEDENLHDNNDDDDDDDEGVVKGRKVDSKGLHSVSGTPRKSASGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYPTLEQFESDVYLICSNAMQYNSPDTIYHKQARSIQELARKKFEKLRIDFEHSQSELKSEQKTRLNSLVKKQAKKPVGRASQEPVGSDFSAGATLANIGDVLPTTHPIQGGSCERPCNNDGLAEGNAFLIDANQDKAEEFLSGKSQLSKMGRKPFALDENRRATYNVSLQPVAKSDSVFMTFESEIKQLVTVGLHAEYSYARSLARFAATLGPVAWKIASQRIQQALPAGCKFGHGWVGEYEPLPTPVLMLDNRVQKEPSFISKSRSNTELIKGDKNGKIPESSMEHHVHRLMLEGKQPSVDPASGLTSEGKPSLFGSAGIRPSTPVSVLYQQQNVQSRRSGKRENKGLKQVESNSLPSSNQNDAGLSAKFSSNAPTGVSKPREMVPRNMNILPPIPFKEPDTNGVASGDLPNGKVTNSSLNRRSTGPPSESSSNQAGRAAPFVSHGQDQSLTDPVQLMRMLAEKAQKQQTSNPSPVETPPVTPSVPSGRRDDLSNAAAAAARAWMSVGAGGFKQGPDNSSSPKSQISADSLYNPSREFHQHIPRTRGEFPSGGMPFQSEKNNFPFQALVSQPIHPGGVSQFPNRSMVFPQLAATDLSRFPMQPAWQGLGPHGQPRQKPETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1568 904 MobiDBLite consensus disorder prediction 599 627 - -
Dere04g1568 904 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 903 - -
Dere04g1568 904 MobiDBLite consensus disorder prediction 1 192 - -
Dere04g1568 904 SUPERFAMILY Bromodomain 182 294 IPR036427 GO:0005515
Dere04g1568 904 MobiDBLite consensus disorder prediction 762 778 - -
Dere04g1568 904 Pfam Bromodomain 201 281 IPR001487 GO:0005515
Dere04g1568 904 MobiDBLite consensus disorder prediction 546 697 - -
Dere04g1568 904 MobiDBLite consensus disorder prediction 33 48 - -
Dere04g1568 904 Gene3D - 194 315 IPR036427 GO:0005515
Dere04g1568 904 MobiDBLite consensus disorder prediction 759 778 - -
Dere04g1568 904 MobiDBLite consensus disorder prediction 712 746 - -
Dere04g1568 904 MobiDBLite consensus disorder prediction 1 16 - -
Dere04g1568 904 PRINTS Bromodomain signature 258 277 IPR001487 GO:0005515
Dere04g1568 904 PRINTS Bromodomain signature 224 240 IPR001487 GO:0005515
Dere04g1568 904 PRINTS Bromodomain signature 240 258 IPR001487 GO:0005515
Dere04g1568 904 MobiDBLite consensus disorder prediction 62 126 - -
Dere04g1568 904 ProSiteProfiles Bromodomain profile. 207 277 IPR001487 GO:0005515
Dere04g1568 904 MobiDBLite consensus disorder prediction 658 697 - -
Dere04g1568 904 MobiDBLite consensus disorder prediction 127 163 - -
Dere04g1568 904 CDD Bromodomain 195 291 - -
Dere04g1568 904 ProSitePatterns Bromodomain signature. 213 269 IPR018359 -
Dere04g1568 904 SMART bromo_6 188 296 IPR001487 GO:0005515
Dere04g1568 904 MobiDBLite consensus disorder prediction 573 587 - -
Dere04g1568 904 MobiDBLite consensus disorder prediction 851 904 - -
Dere04g1568 904 MobiDBLite consensus disorder prediction 880 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1568 Dere-ChrDere04 17370178 17376053 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1568 04 17370178 17376053 Dere04g1568 04 17370178 17376053 ECH