Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1314 ATGGCGTCCTGCAGATTCCCCTGTATGCTTCTTCTTCTCTTGATATTCCCAACTTGTTCTCACTCCATCACATTCACCGTCACCAACAACTGCACGCACACCATATGGCCCGGCACGCTCTCCGGTTCAGGGTCGCCGGAACTGTCGCCGACCGGGTTCCGGTTGGAGCCGGGGAGAAGTATGAAACTGACGAGTGGGCCGAAGTGGTCAGGGAGGATATGGGGAAGGACAGGATGCAAATTCGATGGAAATGGAAATGGGAAGTGTGAAACAGCGGATTGTGGGGGAAAGCTGGAATGTGAAGGGAATGGAGCTGCGCCTCCTGCGTCGCTGTTTGAGATAACACTTGGTGCAGGGAAGGACCAAGACTTCTACGATGTGAGCCTGGTGGATGGCTACAATCTGCCTCTCCTTGCTGTTCCAAGAGGGGTCTATGGTACCTCTGCATGTAATTCCACTGGCTGTATTTCTGATCTCAACAGAGGTTGCCCTAAAGAGCTTCAAGTAGTGATTGGAAATGGACGCCAAGGTGGCAGTGTAGTTGGGTGTAGGAGTGCTTGCGAGGCGTTTGGATCGGATCAGTACTGTTGCAGCGGACAATATGCCAACCCATCGACATGTCGTCCCTCCTCTTATTCAACCACTTTCAAGAAGGCATGTCCAAGAGCTTACAGCTATGCATATGATGACACCACCAGCACTTTCACCTGCAAAGCTTATGGATATCAAATTATTTTCTGTCCCAACGGCAAGAGGTATTATCTCAGACTACTTTCTCCCTCTTTACTTTGCCATATACTTGCAGAGAATTTCAACCCCAAAACTAACATTTGGCATTACGACGTAGGGTTAGAAAAAGCCGTGGTTGGAGGTAGGAAAAAAGGGTCTTGTCAAGCATATGGAAATGAAGACCGGTTGAGTGCTATACTTTGA 933 0.492 MASCRFPCMLLLLLIFPTCSHSITFTVTNNCTHTIWPGTLSGSGSPELSPTGFRLEPGRSMKLTSGPKWSGRIWGRTGCKFDGNGNGKCETADCGGKLECEGNGAAPPASLFEITLGAGKDQDFYDVSLVDGYNLPLLAVPRGVYGTSACNSTGCISDLNRGCPKELQVVIGNGRQGGSVVGCRSACEAFGSDQYCCSGQYANPSTCRPSSYSTTFKKACPRAYSYAYDDTTSTFTCKAYGYQIIFCPNGKRYYLRLLSPSLLCHILAENFNPKTNIWHYDVGLEKAVVGGRKKGSCQAYGNEDRLSAIL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1314 310 PRINTS Pathogenesis-related protein signature 85 114 IPR001938 -
Dere04g1314 310 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Dere04g1314 310 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Dere04g1314 310 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Dere04g1314 310 PRINTS Pathogenesis-related protein signature 123 139 IPR001938 -
Dere04g1314 310 Pfam Thaumatin family 29 248 IPR001938 -
Dere04g1314 310 ProSiteProfiles Thaumatin family profile. 22 250 IPR001938 -
Dere04g1314 310 PIRSF PR5 2 280 IPR001938 -
Dere04g1314 310 ProSitePatterns Thaumatin family signature. 85 100 IPR017949 -
Dere04g1314 310 Gene3D Thaumatin 23 248 IPR037176 -
Dere04g1314 310 SUPERFAMILY Osmotin, thaumatin-like protein 24 249 IPR037176 -
Dere04g1314 310 FunFam THAUMATIN-LIKE PROTEIN 1 23 248 - -
Dere04g1314 310 CDD TLP-PA 24 247 - -
Dere04g1314 310 PANTHER OS03G0233200 PROTEIN 11 248 IPR001938 -
Dere04g1314 310 SMART tha2 25 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1314 Dere-ChrDere04 14877552 14879479 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1314 6 249 Receptor kinase-like Gene Family AT5G38280 44.578 6.57e-70 227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1314 04 14877552 14879479 Dere04g1314 04 14877552 14879479 ECH