Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1306 ATGGGTTTCAATAGAGACGAAGAATCAAGTATCCAAGTCCCCGACAACATCAAAAAGCTTTCCATTTTAAGGTACAATTCCCCATTTGTCCAAATCGTCCTCATTGGTTTGGTCTGCTTCTGCTGTCCCGGCATGTTCAATGCCCTCTCTGGTATGGGAGGAGGTGGCCAAGTCGACCACACAGCTTCCAACAACTCCCTCACTGCCCTTTACACCGCCTTCGCCATTTTCGGCATCCTCGGTGGTGCCATCTACAACATCCTCGGACCCCACATAACCCTCTTCGCTGGTTGCTCCACCTATGTCCTCTATTCTGGTTCCTTCCTCTACTACAACCATTACCACCACCAAGCCTTCGCTATAGTCGCAGGTGGTCTTCTTGGAGTAGGTGCTGGTCTCCTGTGGGCTGCACAGGGTGCTATCATGACATCATACCCTCCAGCGAATCGAAAAGGGACTTATATTTCCATTTTCTGGAGTATATTCAACATGGGTGGTGTGATTGGTGGGTTAATTCCTTTTACTCTGAATTACCATCGTAGTGAGGCTGCTTCTGTGAACGATGGAACCTACATAGGCTTTATGTGTTTCATGTCGATTGGCACCATTTTGTCACTGGCTATCTTGCCGCCTAGTAAGGTGGTTCGTGATGATGGGAGTAAGTGTACAAATATCTTGTACTCCAATGCGTCCACTGAGGCTCTTGAGATACTAAAGCTGTTCTTCAATTGGAAAATGCTTCTTATAGTTCCTGCTGCTTGGTCTAGCAACTTCTTTTATACTTATCAATTCAATAATGTTAATGGGGCGTTGTTCAATTTGAGGACCAGAGGGTTAAACAATGTGTTCTATTGGGGAGCACAGATGTTGGGTTCAGTGGGAATTGGATACATAATGGATTTCAGTTTTAAGAGCAGGAGGAAGAGAGGGTTTGTGGGAATCTGTGTGGTTGCTGTTCTCGGGTCTGCTATATGGGGTGGTGCACTTGCTAATCAGCTTAGGTACTACCAAAATGATTGGCATGAGAAATTGGATTTCAAGGACACAGGCTCTGACTTTGCTGGACCATTTGTCTTGTATTTTAGTTTTGGATTGCTGGATGCCATGTTTCAGAGCACGGTTTACTGGGTTATTGGAGCCCTTGCTGATGATTCTGAGATCCTTAGCAGGTACACTGGGTTCTACAAAGGAATACAAAGTGCAGGAGCAGCAGTAGCTTGGCAAGTTGATACACATAAGGCATCTTTCATGTCCCAGTTGATTGTGAATTGGGTGCTCACTACAGTAAGCTATCCATTACTATTGACTCTGGTGATGTTGGCTGTGAAGGAAGACAATAAGGCTGAAGAGGAAGCTGCCAAACGGGGTGATTCTTCAGCCGCTAACAATGGCTGTGCCTAA 1401 0.4568 MGFNRDEESSIQVPDNIKKLSILRYNSPFVQIVLIGLVCFCCPGMFNALSGMGGGGQVDHTASNNSLTALYTAFAIFGILGGAIYNILGPHITLFAGCSTYVLYSGSFLYYNHYHHQAFAIVAGGLLGVGAGLLWAAQGAIMTSYPPANRKGTYISIFWSIFNMGGVIGGLIPFTLNYHRSEAASVNDGTYIGFMCFMSIGTILSLAILPPSKVVRDDGSKCTNILYSNASTEALEILKLFFNWKMLLIVPAAWSSNFFYTYQFNNVNGALFNLRTRGLNNVFYWGAQMLGSVGIGYIMDFSFKSRRKRGFVGICVVAVLGSAIWGGALANQLRYYQNDWHEKLDFKDTGSDFAGPFVLYFSFGLLDAMFQSTVYWVIGALADDSEILSRYTGFYKGIQSAGAAVAWQVDTHKASFMSQLIVNWVLTTVSYPLLLTLVMLAVKEDNKAEEEAAKRGDSSAANNGCA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1306 466 PANTHER ET TRANSLATION PRODUCT-RELATED 29 450 - -
Dere04g1306 466 Pfam Ion channel regulatory protein UNC-93 56 253 IPR010291 -
Dere04g1306 466 CDD MFS_unc93-like 30 443 - -
Dere04g1306 466 Gene3D MFS general substrate transporter like domains 26 444 IPR036259 -
Dere04g1306 466 SUPERFAMILY MFS general substrate transporter 33 447 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1306 Dere-ChrDere04 14835060 14836625 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0744 05 12959142 12960929 Dere04g1306 04 14835060 14836625 CCT
Dere04g1306 04 14835060 14836625 Dere04g1306 04 14835060 14836625 ECH