Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1294 ATGGATGGGCCCAAATCTGGCCCGACAAATAAGAAAAGTCTTGACGTAACTCATATAAAACCCAAACATCCCACAGAGAAACGAGACAGTGCTATACCTATTGTTCTCCGATACGACGAAGCCATGTCTCCAGGTCCCGTTGTTGAGGCCGCCGCTGAGCAACAACTTCCCTCCACCGAGGAGACTGATAAGAAAATTCATGAGCCGCAGGAGGACGATGCCCCCGTTGTTGAGGATGTGAAGGATGATGACAAAGACGAAGACGATAACGATGAGGACGACGAAGATGACGATGACAAGGAAGATGGTGCTCAAGGCGCTACTGAGGGTTCAAAGCAGAGCAGAAGTGAGAAGAAGAGTCGGAAAGCAATGTTGAAGCTGGGACTGAAACCTGTTACTGGTGTTAGTAGGGTCACAATCAAGAGAACAAAAAATATTCTTTTTTTCATCTCAAAGCCTGATGTGTTCAAGAGCCCAAATTCAGAAACCTATGTCATATTTGGGGAAGCCAAGATAGAGGATTTGAGCTCACAGTTGCAGACACAAGCTGCTCAGCAGTTCAGGTTACCTGATATGGGATCTGTGATGGCAAAACCAGATTCTGCTGCTGCAGCTGCTCCAGGAGCACAGCCCGATGAGGAAGAAGAGGAGGTTGATGAAACTGGAGTGGAGCCTCGTGACATTGACTTGGTTATGACACAGGCTGGAGTGTCAAGAAGCAAGGCCGTCAAGGCTCTCAAGACTTACAACGGGGACATTGTTGGTGCCATCATGGAGCTCACTACTTAA 789 0.4791 MDGPKSGPTNKKSLDVTHIKPKHPTEKRDSAIPIVLRYDEAMSPGPVVEAAAEQQLPSTEETDKKIHEPQEDDAPVVEDVKDDDKDEDDNDEDDEDDDDKEDGAQGATEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRLPDMGSVMAKPDSAAAAAPGAQPDEEEEEVDETGVEPRDIDLVMTQAGVSRSKAVKALKTYNGDIVGAIMELTT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1294 262 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 124 176 - -
Dere04g1294 262 Gene3D - 223 260 - -
Dere04g1294 262 MobiDBLite consensus disorder prediction 199 226 - -
Dere04g1294 262 Pfam NAC domain 117 172 IPR002715 -
Dere04g1294 262 MobiDBLite consensus disorder prediction 1 125 - -
Dere04g1294 262 CDD NAC_NACA 128 175 - -
Dere04g1294 262 MobiDBLite consensus disorder prediction 58 74 - -
Dere04g1294 262 Pfam HYPK UBA domain 222 261 IPR044034 -
Dere04g1294 262 Gene3D - 123 176 IPR038187 -
Dere04g1294 262 CDD UBA_NAC_euk 225 261 - -
Dere04g1294 262 ProSiteProfiles NAC A/B domain profile. 114 179 IPR002715 -
Dere04g1294 262 MobiDBLite consensus disorder prediction 15 34 - -
Dere04g1294 262 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 53 261 IPR016641 GO:0005854
Dere04g1294 262 MobiDBLite consensus disorder prediction 75 103 - -
Dere04g1294 262 SMART NAC_2 117 173 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1294 Dere-ChrDere04 14716753 14718916 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1294 04 14716753 14718916 Dere04g1294 04 14716753 14718916 ECH