Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1238 ATGGGTGAGTGGCAGTCACTCCTCCAGTCCATTTTTCTTGGCCTCATTTTCTCTTTCCTTCTTGCTAAGCTGATATCCATCGTCGTATCGTTCAAGGACGATAATCTGACTATTACTCGCAGCAGTAGCAGTAGCACCGACCATAAAAGCAATCGCAGCAAGATAGAAGCCGAAGCCATCCCGTTTGCGCGCAGGTCTGATGCCGACGAAGGCGAGCACCAAGAGGTTGAATCGGTCATGGCCGAGCAGGGCAGTGTGAGAAATGAAAGTGTAGACGGTGATGACGACTGTGACGATGATTGGGAGGGAGTGGAAAGTACAGAATTGGACGAGGCCTTCAGTGCCGCAACGGCTTTTGTGGCTGCTGCTGCTGCCGATCGGCTCTCGCAGAAGGTGTCCAGTGATGTGCAGCTCCAGCTTTATGGGCTGTACAAGATTGCCACCGAGGGGCCCTGTTGTACGCCACAGCCTTCGGCACTCAAAATGACGGCTCGAGCCAAATGGCAAGCATGGCAAAAATTGGGTGCTATGCCTCCTGAAGATGCAATGCAGAAGTACATTGATATTGTGACGGAGCTATACCCTACTTGGTTAGATGGTTCAGCTTTGAGGAGCAAAACTGGAGATGGTGCTGGCTCAAGTTCAGAGTCTAAGGGACCGATGGGACCAGTATTCAGCACTTTTGTGTATGAAGAGGAAGCTGGCAGTGATTTAAAAATGGATGCAATTCATGGATTTGCCAGAGAAGGAGACTCAACTAATCTGCTCAAGTGTATTGAAAATAGTGTCTCAGTGAATCTGAAGGACAGTGAGGGTCGAACACCATTACATTGGGCTGTGGATCGTGGTCACCTTGAAGTCACAAAACTGCTTGTCAGTAGGAATGCTGATGTAAATGCCAAGGATAATGATGGACAAACTCCGTTGCATTATGCTGTTGTATGTGAGAGAGAAGCCATAGCTGAGTATTTAGTGAAGCATAATGCTGACACAGATTTGAAGGATAATGATGGTAGTTCCTCACGTGACCTCTGCGAGTCAAACTGGCCTTGCATGCAAGGTGTGGGGAAGTAA 1074 0.4851 MGEWQSLLQSIFLGLIFSFLLAKLISIVVSFKDDNLTITRSSSSSTDHKSNRSKIEAEAIPFARRSDADEGEHQEVESVMAEQGSVRNESVDGDDDCDDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDVQLQLYGLYKIATEGPCCTPQPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSALRSKTGDGAGSSSESKGPMGPVFSTFVYEEEAGSDLKMDAIHGFAREGDSTNLLKCIENSVSVNLKDSEGRTPLHWAVDRGHLEVTKLLVSRNADVNAKDNDGQTPLHYAVVCEREAIAEYLVKHNADTDLKDNDGSSSRDLCESNWPCMQGVGK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1238 357 Gene3D - 230 349 IPR036770 -
Dere04g1238 357 PRINTS Ankyrin repeat signature 272 287 IPR002110 GO:0005515
Dere04g1238 357 PRINTS Ankyrin repeat signature 320 334 IPR002110 GO:0005515
Dere04g1238 357 Pfam Acyl CoA binding protein 110 190 IPR000582 GO:0000062
Dere04g1238 357 ProSiteProfiles Ankyrin repeat profile. 304 336 IPR002110 GO:0005515
Dere04g1238 357 ProSiteProfiles Ankyrin repeat region circular profile. 304 336 - -
Dere04g1238 357 MobiDBLite consensus disorder prediction 60 97 - -
Dere04g1238 357 PRINTS Acyl-coA-binding protein signature 155 170 IPR000582 GO:0000062
Dere04g1238 357 PRINTS Acyl-coA-binding protein signature 176 193 IPR000582 GO:0000062
Dere04g1238 357 PRINTS Acyl-coA-binding protein signature 132 150 IPR000582 GO:0000062
Dere04g1238 357 ProSiteProfiles Ankyrin repeat region circular profile. 271 303 - -
Dere04g1238 357 Gene3D - 103 214 IPR014352 -
Dere04g1238 357 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Dere04g1238 357 SMART ANK_2a 271 300 IPR002110 GO:0005515
Dere04g1238 357 SMART ANK_2a 304 333 IPR002110 GO:0005515
Dere04g1238 357 Pfam Ankyrin repeats (3 copies) 246 335 IPR002110 GO:0005515
Dere04g1238 357 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 109 199 IPR000582 GO:0000062
Dere04g1238 357 MobiDBLite consensus disorder prediction 60 77 - -
Dere04g1238 357 SUPERFAMILY Acyl-CoA binding protein 108 198 IPR035984 GO:0000062
Dere04g1238 357 SUPERFAMILY Ankyrin repeat 240 345 IPR036770 -
Dere04g1238 357 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 2 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1238 Dere-ChrDere04 13844583 13848534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1238 1 353 Acyl Lipid Metabolism Gene Families AT5G53470 62.890 1.07e-149 424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1238 04 13844583 13848534 Dere04g1238 04 13844583 13848534 ECH