Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1227 ATGATTTCAAATCCGAACTTCATCTATTATGCCTGCATTGCGAAAGGAACCACAATTGTCGCCCAACACAGGTCCAATGAGCCACAGATCGAAGAATTAGCTGCAGAATGCCTTGCGCAAGCTCCTCTCCACCACTCCATTTATTCTCACACTGTGAAGAAAAGAACCTATACGTTCTTAATTGATGAACCTTTTGTTTATTTCGCGATTTTCGATGAAGAGCTCGTGAATTCGGAGGCCCTTTGGTTTTTAGATCGCATCAAGTGCGGATTAGACGAGATGTTGAAAGGCAAGTCTATCACGTGTTCTGATGATTTCACGCCGCTTTGTTTTCAAGCTCAATTCGATCCTATCTTTCGTGAATCAATGGCTTCGGATTTGGAAATGGTAAATTCATTGCCAGGCGAAAACAAGGATGACCAAAACGCAAGCGTGGAATCAATGAAAGGGAAGAGATCGTTGACGGCATCTTCGCCTGGGCAGCCCAACAGAAGTTCGAAGAAGAAGAAAAGATTGAGCATGGATGCCATGGAGAATAAATTGGATGTATGCGATGACATAAACGGTTGCCCCAGAGATTTTGCATTGTCGGTACCAAAGGGCTTGGTCAACGATCGACAAAAAGCAAAGCAGATATGGAAGAAACAAGTGTGGGTGGTGCTATTACTGGACCTGTTTGTGTGCGCAGTGTTATTTGCAATATGGTTATGGGTTTGCAGAGGGTTTCAGTGCATGCGGAGTTGA 744 0.4409 MISNPNFIYYACIAKGTTIVAQHRSNEPQIEELAAECLAQAPLHHSIYSHTVKKRTYTFLIDEPFVYFAIFDEELVNSEALWFLDRIKCGLDEMLKGKSITCSDDFTPLCFQAQFDPIFRESMASDLEMVNSLPGENKDDQNASVESMKGKRSLTASSPGQPNRSSKKKKRLSMDAMENKLDVCDDINGCPRDFALSVPKGLVNDRQKAKQIWKKQVWVVLLLDLFVCAVLFAIWLWVCRGFQCMRS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1227 247 Gene3D Longin domain 2 128 - -
Dere04g1227 247 PANTHER PHYTOLONGIN PHYL1.2 1 245 IPR044783 GO:0016020
Dere04g1227 247 MobiDBLite consensus disorder prediction 135 163 - -
Dere04g1227 247 SUPERFAMILY SNARE-like 8 105 IPR011012 -
Dere04g1227 247 MobiDBLite consensus disorder prediction 131 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1227 Dere-ChrDere04 13756805 13757548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1227 8 244 Miscellaneous Gene Families AT3G54300 23.387 1.43e-15 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1227 04 13756805 13757548 Dere04g1227 04 13756805 13757548 ECH