Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1220 ATGGGCTGCTATTGTTCGAAGAAAGCTAAACCACCAGCTTATGAGGAGCCCACTGTTCTTGCTGCTGAGACACCTTTCACGGTGAGTGAAGTAGAGGCGCTACACGAGCTCTATAAGAAGTTGAGCAATTCCATTATTAAAGATGGTCTTATTCACAAGGAAGAATTCCAGCTGGCGCTCTTCAGGAATAGAAACAAGAGAAATCTGTTTGCCGACAGGATTTTTGACTTATTTGATGTCAAGCGCAATGGGGTTATTGACTTTGGGGAATTTGTTCGATCATTGGGTGTTTTTCACCCAAACTCACCGATGGAAGAGAAAATTGCTTTTGCTTTTAGGTTGTATGATCTGAGGCAGACAGGGTACATTGAGCGAGAGGAGTTGAAGGAAATGGTACTGGCACTTCTGCACGAGTCAGATCTTTTTCTTTCGGATGATATTATCGAAACCATTGTGGATAAGACGTTTAGTGATGCTGATGCAAAAGGTGATGGAAGGATTGATCAAGAGGAGTGGAAAGCATTTGTGTCTGAACATCCTTCTTTGATGAAGAACATGACCCTTCCTTACTTAAAGGATATAACCTTAGCATTTCCAAGTTTTCTCGTAAGAACAGAAGTTGAAGATTCACAGTCTCCTCAGTTCAATCTCATACATGCTGGCGTATTCGTAATGCAATCAGTTGATGAGAACAAGGAGAGAAATTTGAAGCGTTCAAGATCACTGCCTTTCAAAATGCCTGTGACAGACTGTAATGATGCACCAAATATTGATGACAGCGTATTTTTCCCTGTCGAGGAGATTGTACAATACCCACTGCCTGGATGTGTTGCACCGTCTTCAATAAGTTTCAGCCCCGATGATAATTTAATTGCTTATTTATTTAGTCCTGATCACACGTTGAATAGGAAGGTTTTTTCTTTTGATCTGAAGACCTCCAAACATGAATTGCTATTTAGTCCCCCTGACGGTGGCCTTGATGAAAGCAATATATCTCCAGAAGAAAAGTTAAGGAGGGAGAGGTTGAGGGAGCGTGGTTTAGGGGTCACACGGTATGAATGGGTGACTACGAGTTCCAAAAGAAAAGCAATCATGTTGCCTTTGCCTACTGGGATTTATATCCAGGATGCATCCTATTCAAAAGCAGAGCTCAAGCTTTCAAGTATACCAGGTTCACCAATCATTGATCCACATCTATCCCCAGATGGGTCAATGATCGCCTGTGTAAGAGACTGTGAATTGTTTGTTCTGAATCTGTTGTCTAATGAATCAAAGCAGTTGACCCATGGTGCCAAGGAAAATGGTTTGACTCATGGCCTTGCTGAATATATAGCTCAGGAGGAGATGGATAGGAAAACTGGATATTGGTGGTCGCTAGACAGTAAATATATAGCTTTTACTGAAGTTGATTCTTCTGAAGTTCCCCTTTTTAGAATTATGCACCAAGGTAAAAGCTCAGTTGGTTTAGAGGCACAGGAAGACCATCCTTATCCTTTTGCTGGAGCTTCAAATGTTAAAGTTCGTCTTGGTGTTGTTTCGGTAGCTGAAGGATCCACTACTTGGATGGATCTTGTCTGTGGGGGAACAGATCAGCAAAACAATGAGGAAGAATATTTGGCAAGAGTCAATTGGATACATGGAAACTTTCTCACTGCCCAGGTCTTGAACAGGCACCAAACAAAAATGAAGATCCTAAAATTTGATATTAGAACAGGTCAGAGGAAAACTCTATTGGTGGAAGAACACAGCACGTGGATCAATATACATGACTGTTTTACCCCTCTTGATAAAGGAGTTACCAAGTTTTCTGGGGGATTTATTTGGGCTAGTGAGAAGACAGGATTCAGACATCTTTATCTTCATGATGCAAATGGGACTTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATTGCTGGCGTGAATGAGGCTACAGGTTTAGTCTATTTCACTGGAACCTTTGATGGGCCTTTGGAATCTAACTTATATTGTGCTAAGCTTTACATAGATGGAAGTCAACCACCGCATGCCCCTGTTAGACTTACTCATAGCAAGGGAAGGCACATTGTGGTCCTTGATCATCTTATGCGAAATTTTGTTGATATCCATGACGCGCTTGATTGTCCCCCTCGGGTGTTACTTTGCTCACTGGACAATGGAAGCATAATCATGCCCTTGTATGAGCAGCCATTTACAATTCCAAGATTTAAAAGGTTTCAACTTGAGCCACCAGAGATTGTGGAAATACAGGCTAAAGATGGCACCCCATTGTATGGGGCTCTATATATGCCAGATGCATCAAGATTTGGGCCTCCGCCTTACAGAACTATGATCCATGTTTATGGGGGTCCAAGTGTACAGCTTGTCTGTAATTCTTGGATTAATACAGTTGACATGAGAGCACAACGTTTGCGGAACCAAGGCATCTTAGTTTGGAAGTTAGACAATAAAGGAACTGCTAGACGGGGGTTGAAGTTTGAAGGCTATATAAAGCACTGTCTTGGTCAAATTGATGCTGATGATCAACTGAGTGGAGCTGAGTGGCTTGTCAAACAAGGGCTTGCGAAAGTTGGTCACATTGGCCTGTATGGGTGGAGCTATGGTGGGTATCTTTCTGCTATGACCCTCTCGAGATTCCCAGATTTCTTCAAGTGTGCGGTGGCTGGTGCCCCTGTTACGTCATGGGATGGATATGACACATTTTACACAGAGAAGTACATGGGATTGCCGTCTGAAAATCGAACAGGCTATGAAAGCGGTTCTGTGATGCATCATGTGCACAAGATGAAAGGGCGCTTGTTGCTTGTTCATGGGATGATTGACGAGAATGTACATTTTAGGCACACTGCTAGGCTTGTAAATGCACTTGTGGCTGCTGGAAAACCTTATGAGCTAATGATTTTTCCAGACGAGCGTCACTTGCCTCGACGTCACAGAGATCGAGTTTATATGGAAGAGGGGATCTGGGACTTCATAGACAGGAATCTGTAG 3000 0.4277 MGCYCSKKAKPPAYEEPTVLAAETPFTVSEVEALHELYKKLSNSIIKDGLIHKEEFQLALFRNRNKRNLFADRIFDLFDVKRNGVIDFGEFVRSLGVFHPNSPMEEKIAFAFRLYDLRQTGYIEREELKEMVLALLHESDLFLSDDIIETIVDKTFSDADAKGDGRIDQEEWKAFVSEHPSLMKNMTLPYLKDITLAFPSFLVRTEVEDSQSPQFNLIHAGVFVMQSVDENKERNLKRSRSLPFKMPVTDCNDAPNIDDSVFFPVEEIVQYPLPGCVAPSSISFSPDDNLIAYLFSPDHTLNRKVFSFDLKTSKHELLFSPPDGGLDESNISPEEKLRRERLRERGLGVTRYEWVTTSSKRKAIMLPLPTGIYIQDASYSKAELKLSSIPGSPIIDPHLSPDGSMIACVRDCELFVLNLLSNESKQLTHGAKENGLTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEVPLFRIMHQGKSSVGLEAQEDHPYPFAGASNVKVRLGVVSVAEGSTTWMDLVCGGTDQQNNEEEYLARVNWIHGNFLTAQVLNRHQTKMKILKFDIRTGQRKTLLVEEHSTWINIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYLHDANGTCLGPITEGEWMVEQIAGVNEATGLVYFTGTFDGPLESNLYCAKLYIDGSQPPHAPVRLTHSKGRHIVVLDHLMRNFVDIHDALDCPPRVLLCSLDNGSIIMPLYEQPFTIPRFKRFQLEPPEIVEIQAKDGTPLYGALYMPDASRFGPPPYRTMIHVYGGPSVQLVCNSWINTVDMRAQRLRNQGILVWKLDNKGTARRGLKFEGYIKHCLGQIDADDQLSGAEWLVKQGLAKVGHIGLYGWSYGGYLSAMTLSRFPDFFKCAVAGAPVTSWDGYDTFYTEKYMGLPSENRTGYESGSVMHHVHKMKGRLLLVHGMIDENVHFRHTARLVNALVAAGKPYELMIFPDERHLPRRHRDRVYMEEGIWDFIDRNL 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1220 999 ProSiteProfiles EF-hand calcium-binding domain profile. 103 138 IPR002048 GO:0005509
Dere04g1220 999 SMART efh_1 151 179 IPR002048 GO:0005509
Dere04g1220 999 SMART efh_1 107 135 IPR002048 GO:0005509
Dere04g1220 999 SMART efh_1 70 98 IPR002048 GO:0005509
Dere04g1220 999 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 280 996 - -
Dere04g1220 999 Gene3D - 16 210 - -
Dere04g1220 999 ProSiteProfiles EF-hand calcium-binding domain profile. 147 182 IPR002048 GO:0005509
Dere04g1220 999 SUPERFAMILY alpha/beta-Hydrolases 746 999 IPR029058 -
Dere04g1220 999 SUPERFAMILY EF-hand 19 201 IPR011992 -
Dere04g1220 999 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Dere04g1220 999 SUPERFAMILY DPP6 N-terminal domain-like 275 733 - -
Dere04g1220 999 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 368 713 IPR002469 GO:0006508
Dere04g1220 999 Gene3D alpha/beta hydrolase 741 998 IPR029058 -
Dere04g1220 999 Pfam Prolyl oligopeptidase family 800 999 IPR001375 GO:0006508|GO:0008236
Dere04g1220 999 CDD EFh 107 177 IPR002048 GO:0005509
Dere04g1220 999 Pfam EF-hand domain pair 105 175 IPR002048 GO:0005509
Dere04g1220 999 PRINTS Recoverin family signature 121 139 - -
Dere04g1220 999 PRINTS Recoverin family signature 74 95 - -
Dere04g1220 999 CDD EFh 71 132 IPR002048 GO:0005509
Dere04g1220 999 Gene3D - 264 740 - -
Dere04g1220 999 FunFam calcineurin B-like protein 3 16 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1220 Dere-ChrDere04 13685093 13695348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1220 24 211 EF-hand Containing Proteins AT5G24270 74.468 2.94e-92 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1220 04 13685093 13695348 Dere04g1220 04 13685093 13695348 ECH