Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1170 ATGGACTGCGATTCTCGGACCAGGTCCGGTCCACCGTCCTACAACGCACCATTCCCGATTTACCGTCCCGCCGCATCTTTGTCACCATCACAACCGTCGTCGTCACCGGCGACCCTCCAGATGCACGGTCCGCTTATGTACCCTAAGATCGGTCAGCACGGTCACGCCGCCATTCCTCCCGTCGACCGTGCGTTGCCGCATCACCATACTGCTTCTCATTCCTCTTCTTCAGGATTGGGCATTAAGGTTGCTGTAAAGCCAGAATATTGGATCACCTCGTCGCCTCATTTATCACTGCATGCTGGAGATCTTCCACGGAGTAACTTCCAATTTGATTTTGAATTAGAGAGAAAAATTTTGGCTGAAGCTGAGAAGGAAAGCCCAAACTGGAGCAGATTAGGGATTGATAATCTTCCAACTAAAGGTGCTGAATCAACATCACCAGTGGTTCCTGATTCAAATCCCATTGTGAGCAAATATGTTGCCTTGGGACTCAGCCGAGAAGCTGTTCCCTTAGCTGTTTCAAATTATGGTGATAATCCAACCAAGGTTCGGGAATTTGTCAATGGTTACACCCTTCTGCGCGACATGGGATTTTCATCCAGCGCCATCGCTGATGCCTTGGTTAAGCATGACAATAATACGGATAAGGCACTAGCACATTTTCTTAGCGGCTCATCGTGA 684 0.4898 MDCDSRTRSGPPSYNAPFPIYRPAASLSPSQPSSSPATLQMHGPLMYPKIGQHGHAAIPPVDRALPHHHTASHSSSSGLGIKVAVKPEYWITSSPHLSLHAGDLPRSNFQFDFELERKILAEAEKESPNWSRLGIDNLPTKGAESTSPVVPDSNPIVSKYVALGLSREAVPLAVSNYGDNPTKVREFVNGYTLLRDMGFSSSAIADALVKHDNNTDKALAHFLSGSS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1170 227 Gene3D UBAP1 SOUBA domain 155 227 IPR042575 -
Dere04g1170 227 CDD UBA2_UBAP1_like 187 223 - -
Dere04g1170 227 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 194 225 IPR015940 -
Dere04g1170 227 PANTHER LD44032P 26 225 IPR038870 GO:0000813|GO:0043130|GO:0043162
Dere04g1170 227 MobiDBLite consensus disorder prediction 26 40 - -
Dere04g1170 227 SUPERFAMILY UBA-like 189 225 IPR009060 GO:0005515
Dere04g1170 227 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1170 Dere-ChrDere04 13070852 13074161 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1170 04 13070852 13074161 Dere04g1170 04 13070852 13074161 ECH