Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1162 ATGGATTTGCTTAAAGCCTTGAACTTGAGAGCCTCCCCAATACCATTTTCACCGGTAATCGCTACGATTAACTTCTACTTGCTTCCTCGCTCTCCCAGAAAATTCTCTTTCCAGTTTCGTACCAACCCATTTCATCGTATTTCGGGAAAGTCCCTTATTCTACGTGCCAAGAAAGGAAAATCAGAGTCGGAGCCAGTTCTCGAACCCACAATTTTCGAAGAAATATCAATGGACGATGAAGAGGACGTCCTTGATGATTTTGAATACGAGGAATCAGAGGATGACGTTGGTGATGGTGATGGTGATGACTATTACGAAGAAGAGGAGTATGAAGATGATGATGCTGTACTCTATGTGGGTGATGGGGGCGGAGGAGGTGGAATTTCTCTTGCTGGAACATGGTGGGATAAAAAGGCACTGGCGATTGCTGAAGAGGTTACTAGGTCTTTCGATGGGGAATTGCAAATATATGCTTTTAAGACATTGGTCAATTCCACCATTCAAGTGCGCATCGAGAGGCTTTCAAACAAGTCTGGCTCGCCTAGCATGGAAGATATTGAGGCTTTTTCTACAACCTATAGAGCGAAGTTAGATGAAGCAGAGCTTGCCAAATTTGTGCCTGAAGATATTACTTTGGAGGTGTCTTCTCCTGGTGTTGAAAGGCTAGTCCAGATTCCAAATGATCTAGATCGATTCAAGGAGCGACCTATGTATGTGAAATATGTGAGCAATGAGGACTCAAAAGATCCATCTGCAGAAAGTGAGGGTGTCTTCAGCCTTATAGCCTTCGACCTGGAAACAAAATGTTGCACCTGGGGTTTAGCAGACGTGAGAGTAAATAGAGAGAAAGCAGGGAAAGGAAGACCACTGAGCAAAAAGCAAAGAGAATGGCGTATAAGTACTCCTTTTGATTCCTTACGTTTAGTTAGGTTGTATTCTGAAATGTAA 948 0.4325 MDLLKALNLRASPIPFSPVIATINFYLLPRSPRKFSFQFRTNPFHRISGKSLILRAKKGKSESEPVLEPTIFEEISMDDEEDVLDDFEYEESEDDVGDGDGDDYYEEEEYEDDDAVLYVGDGGGGGGISLAGTWWDKKALAIAEEVTRSFDGELQIYAFKTLVNSTIQVRIERLSNKSGSPSMEDIEAFSTTYRAKLDEAELAKFVPEDITLEVSSPGVERLVQIPNDLDRFKERPMYVKYVSNEDSKDPSAESEGVFSLIAFDLETKCCTWGLADVRVNREKAGKGRPLSKKQREWRISTPFDSLRLVRLYSEM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1162 315 Pfam RimP N-terminal domain 156 220 IPR028989 -
Dere04g1162 315 Gene3D - 136 217 IPR035956 -
Dere04g1162 315 PANTHER OSJNBA0006B20.18 PROTEIN 60 315 - -
Dere04g1162 315 SUPERFAMILY YhbC-like, N-terminal domain 161 220 IPR035956 -
Dere04g1162 315 Hamap Ribosome maturation factor RimP [rimP]. 137 315 IPR003728 GO:0042274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1162 Dere-ChrDere04 12969004 12971723 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1162 04 12969004 12971723 Dere04g1162 04 12969004 12971723 ECH