Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1141 ATGGGAAAGGAAGCGACTGTTGTTATAGTGGGTGCAGGTCCTGCAGGCCTAGCAACGTCAGCATGCCTTAACAGGCTTTCCATCCCCAACATTGTCCTAGAAAAAGATGACTGCCATGCACCTCTTTGGAGGAAACGAACCTACGATCGCTTGAAGCTTCACTTGGCCAAACAATTCTGCAACCTTCCCTATATGCCCTTTCCTTCTGATGCTCCCACCTTTGTCTCCAGAATTGACTTCATGCGTTACTTGGACAACTACGTGTCCCATTTCAACATCAGCGTCAGGTACAATCGCACGGTGGAGACTGCAATGCTGAGCGAGAACGACGGGAAATGGAGGGTCATAGCCAACCGCACGTCGTCGGATGCCACTGAGGTTTATATTTCAGACTTTCTGGTGGTCGCCACTGGTGAGAACAGCGAAGGTTACATCCCCAAGTTGAAAGGGCTCGAAGACTTTGAAGGAGAGTACATTCATTCTAACTGTTATCTGAATGGAAGAGAATGGTACAACAAAAATGTGTTGGTTGTTGGTGCTGGGAATTCTGGAATGGAGATCGCTTATGATCTCACCAATTGGGGTGCCAATACCTCAATGGTCGTTAGAAGCCCGGTAGTTTCTTACTACTTATTACATGTTCTGAGTAAAGAAATGGTGATGGTCGGAATGCATCTGTTGAAGTACATTGGAGTGGAAAAAGTGGACAAACTGATGCTAGCGTTTAGCTTACTCAAGTACGGAGATCTGTCCAAGTACGGGATGAGCAGGCCAAAAGAGGGTCCCTTTCTTATGAAACTCCTGAGGGGTCGTTCCCCTACCATTGATGTGGGCTGCGTGGATAGGATTAAGGAAGGCAAAGTAATGGTTTTTCCAGCCATATCATGCATTAAGAAGGACAAGGTGATCGAGTTTGTGGATGGAAGGGAAGATGAGTTTGATGTTATAATCTTTGCTACGGGATATAGAAGCACTGTATTGAACTGGCTTAAGGATTACAAAGAGCTGTTTAATGAGAATGGAATGCCTAAACGAGATTATCCAAATCATTGGAAAGGAGAGAATGGCTTATACTGTGCAGGCTTTGCGGCAAGAGGACTAGATGGTGTTTCTAATGATGCACAGAAGATAGCAGATGATATCAATCTGGCTTTAGCTTCAAAGAACATAGCTTCTGGTGCAGCTGCTGAAACCTATCCTTACCTCAGGTTGTTGGATGATTAA 1224 0.4518 MGKEATVVIVGAGPAGLATSACLNRLSIPNIVLEKDDCHAPLWRKRTYDRLKLHLAKQFCNLPYMPFPSDAPTFVSRIDFMRYLDNYVSHFNISVRYNRTVETAMLSENDGKWRVIANRTSSDATEVYISDFLVVATGENSEGYIPKLKGLEDFEGEYIHSNCYLNGREWYNKNVLVVGAGNSGMEIAYDLTNWGANTSMVVRSPVVSYYLLHVLSKEMVMVGMHLLKYIGVEKVDKLMLAFSLLKYGDLSKYGMSRPKEGPFLMKLLRGRSPTIDVGCVDRIKEGKVMVFPAISCIKKDKVIEFVDGREDEFDVIIFATGYRSTVLNWLKDYKELFNENGMPKRDYPNHWKGENGLYCAGFAARGLDGVSNDAQKIADDINLALASKNIASGAAAETYPYLRLLDD 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1141 407 Gene3D - 1 392 IPR036188 -
Dere04g1141 407 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Dere04g1141 407 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Dere04g1141 407 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 6 388 - -
Dere04g1141 407 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Dere04g1141 407 Pfam Flavin-binding monooxygenase-like 6 323 IPR020946 GO:0004499|GO:0050660|GO:0050661
Dere04g1141 407 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Dere04g1141 407 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Dere04g1141 407 SUPERFAMILY FAD/NAD(P)-binding domain 5 280 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1141 Dere-ChrDere04 12751982 12753505 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1141 04 12751982 12753505 Dere04g1141 04 12751982 12753505 ECH