Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1136 ATGCACGTGTCACGTGACAGACGAAGACATCTCAATGACCTAACAAAGAGCTCAAGGGTATTCCGGTCATTTCACGATAAAACGGCAGTCTGTCGTCCGTATGCTGTGTCCGCACTGAGGAATACGACAACACTGAACCGGTCTGGTACAGCTATTAGCGGTACCTACACACAACGGACAGCGAGAGTGCACACTCACGCGCCCCCGCGACGATTGTTGCTCATTAGCGCATGTGTCGAGCAGCTACGCTATGCACTCACCACCTGCGATGAACTTGCCTACGTGGCGCTTTGGCGCTGCAACACAAAAGTTACAACATCACGCGCGGGTGATGTCCAAGGTTCATTCCACCACTCTTCGCCACGCCATATCAAACCCCAACCTAGAACCTTTCGTTTTTTCAGAGGTAAATTAAGGCAACTCGTTGACTGGAGAATTGATCTTCAAATGGCTACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGTAACAGAATCAACCCTCCAAGGGTCTCTGTGGATAATGCTAGTTGCCATGATTGTACACTGATCAAGGTTGATAGCGTTAACAAACCTGGAATTTTGCTGGAAGTAGTGCAAATTCTGACTGACCTTGATTTCATAATCACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTTTTTCATGTGACGGATCAGCAAGGAAAGAAGATAACTGACATGAAAACCATTGACTTCATAGAGAAGGCTCTAGGACCCAAGGGCCATAGCACAGAAGGGGTGAAGAGTTGGCCTGCCAAACGGGTTGGGGTGCACTCCATTGGTGATCACACAGCCATTGAGCTCATTGGTAGAGACCGCCCAGGTCTCTTGTCTGAGATTTCAGCTGTCCTTGCCAGTCTCCAATTTAATGTGGTTGCAGCTGAAGTCTGGACTCATAATAGGCGTATAGCGTGCGTTCTGTATGTCAACGATGCTACCACCCGGGCTGTGGATTACCCAGACAAATTATCTCTTATGGAGGAGCAGCTCAACAATATCCTACGTGGATGTGAGGATGACGACAAAGTGGCTCGCACCAGTTTCTCTATGGGTTTCACCCATATGGATAGGCGGCTCCACCAAATGTTGTTTGCTGATCGAGATTATGAATGTGCCGGAGTGATAGCAGACGTTGATTACCCCACCTCTTTTAGGCCTAAAATAACCATTGAGCGTTGTGAGGAAAAAGGGTACTCAGTGGTTAGTGTCAGGTGCAAAGATCGGGCGAAACTGATGTTTGACATTGTTTGCACTCTCACTGACATGCAATATGTTGTTTTCCATGCTACAATCTCATCAGATGGCCCATATGCATCCCAGGAGTACTTTATTCGGCACATGGATGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCATTAAATGTATTGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGTGTAAGCCTTGAGCTGTGTGCAAAGGATAGAGTGGGGCTGCTATCTGACGTAACTAGGATTCTACGAGAGAATGGGTTGACAGTTTGTAGAGCAGGTGTATCTACCATTGGAGAGCAAGCACTGAATGTGTTCTACGTGAGAGATGCTTCTGGAAATCCAGTGGACATGAAGATTGTCGAAGCACTTCGTAGAGAGATTGGGCAGACAATGATGGTCAAAGTCAAGAGGGTACCATCCAATGCCAAGGCACCTGAGACCCGAGGATGGGCCAAAACAAGCTTCTTCTTTGGCAACTTGTTGGAAAGATTCTTGTCTTAA 1788 0.4676 MHVSRDRRRHLNDLTKSSRVFRSFHDKTAVCRPYAVSALRNTTTLNRSGTAISGTYTQRTARVHTHAPPRRLLLISACVEQLRYALTTCDELAYVALWRCNTKVTTSRAGDVQGSFHHSSPRHIKPQPRTFRFFRGKLRQLVDWRIDLQMATVCWPYFDPEYENFSNRINPPRVSVDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDMKTIDFIEKALGPKGHSTEGVKSWPAKRVGVHSIGDHTAIELIGRDRPGLLSEISAVLASLQFNVVAAEVWTHNRRIACVLYVNDATTRAVDYPDKLSLMEEQLNNILRGCEDDDKVARTSFSMGFTHMDRRLHQMLFADRDYECAGVIADVDYPTSFRPKITIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSDVTRILRENGLTVCRAGVSTIGEQALNVFYVRDASGNPVDMKIVEALRREIGQTMMVKVKRVPSNAKAPETRGWAKTSFFFGNLLERFLS 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1136 595 SUPERFAMILY ACT-like 274 349 IPR045865 -
Dere04g1136 595 CDD ACT_ACR_4 490 561 - -
Dere04g1136 595 SUPERFAMILY ACT-like 181 255 IPR045865 -
Dere04g1136 595 SUPERFAMILY ACT-like 488 557 IPR045865 -
Dere04g1136 595 CDD ACT_ACR_3 412 486 - -
Dere04g1136 595 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 155 565 IPR040217 -
Dere04g1136 595 ProSiteProfiles ACT domain profile. 492 569 IPR002912 -
Dere04g1136 595 ProSiteProfiles ACT domain profile. 279 362 IPR002912 -
Dere04g1136 595 CDD ACT_ACR_1 184 255 - -
Dere04g1136 595 Gene3D - 487 568 - -
Dere04g1136 595 Gene3D - 277 357 - -
Dere04g1136 595 ProSiteProfiles ACT domain profile. 186 263 IPR002912 -
Dere04g1136 595 Pfam ACT domain 279 346 IPR002912 -
Dere04g1136 595 Pfam ACT domain 186 234 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1136 Dere-ChrDere04 12712751 12721155 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1136 04 12712751 12721155 Dere04g1136 04 12712751 12721155 ECH