Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0993 ATGCAATCACCCTCGCTCTGTTTTAAGTGCTTAGCATATACCAGACTGATGTTATCATCAAGTATATTTATAGGGTCACTTCTCCTCTCTATCTTTTGTCACTTGGTTGATTGTCTTCCCCCCACAATTCTTGAAGCTACAAACATGGCTTCTGAGAAGGTTGAGACTGTGGTTGCAGGAAACTACTTAGAAATGGAGAGAGAGGAGAGAGATTCTAAGTCAGCTAAAAGCAAGCTATCCAGGTTCTTCTGGCATGGTGGCTCAGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTACTGACGTTACCATATTCGTTTTCGCAACTGGGAATGCTATCTGGCATTCTATTTCAGCTTTTTTATGGGTTGATGGGGAGCTGGACTGCTTATCTTATCAGTATCCTTTATGTTGAGTACAGAACCAGAAAGGAGAGAGAAAAGGTTGATTTCAGGAACCATGTGATTCAGTGGTTTGAAGTTCTTGATGGGCTCCTAGGCAAACACTGGAGAAATATAGGCCTCTTTTTCAACTGCACTTTCCTTCTGTTTGGGTCAGTGATTCAACTAATTGCCTGTGCGAGTAACATATACTACATAAACGACAATCTCGACAAAAGAACCTGGACTTACATCTTTGGCGCCTGCTGTGCGACAACAGTATTCATCCCTTCTTTCCACAATTACAGAATTTGGTCATTCTTGGGCCTCATGATGACCAGTTACACTGCATGGTATCTCACCATAGCTTCCCTTCTCCACGGACCGGTTGAGGGGGTGAAGCATTCAGGCCCAACCAAATTGGTTCTATACTTTACTGGGGCTACTAACATTCTCTACACTTTTGGTGGACATGCTGTCACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTCAAGCTGATATATCTGTTGGCAACACTGTATGTGTTGACTTTAACTTTACCATCAGCAGCTGCAGTGTATTGGGCATTTGGGGACATGCTTCTTACTCATTCCAATGCCCTCTCTTTGCTCCCAAGGACAGGCTTCAGGGATACCGCTGTTGTTCTCATGCTTATTCACCAGTTCATAACTTTTGGATTTGCCTGCACTCCTCTGTACTTTGTGTGGGAGAAATTCATTGGAGTGCATGAAACTAAGAGCATGTTCAAAAGGGCATTGGCTAGACTTCCTGTGGTGGTTCCAATATGGTTTCTTGCTATTGTGTTCCCTTTCTTTGGGCCCATCAACTCAACTGTTGGATCTCTCTTGGTCAGTTTCACTGTTTACATTATTCCTGCCATGGCACACATGGTCACCTTCGCTTCTGCCCCAGCTAGAGAGAATGCAGTGGAGAGACCACCATCCTTTTTAGGAGGTTGGGTAGGAACGTACTCCATGAACGTGTTTGTGGTGGTGTGGGTTTTGGTGGTAGGATTTGGATTGGGAGGTTGGGCAAGCATGCTAAATTTCATCCAACAAGTTAACACATTTGGGCTTTTTGCCAAGTGCTATCAGTGTCCCCCTCACAAGGCATAA 1542 0.4423 MQSPSLCFKCLAYTRLMLSSSIFIGSLLLSIFCHLVDCLPPTILEATNMASEKVETVVAGNYLEMEREERDSKSAKSKLSRFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTSYTAWYLTIASLLHGPVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKLIYLLATLYVLTLTLPSAAAVYWAFGDMLLTHSNALSLLPRTGFRDTAVVLMLIHQFITFGFACTPLYFVWEKFIGVHETKSMFKRALARLPVVVPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPAMAHMVTFASAPARENAVERPPSFLGGWVGTYSMNVFVVVWVLVVGFGLGGWASMLNFIQQVNTFGLFAKCYQCPPHKA 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0993 513 PANTHER OS05G0424000 PROTEIN-RELATED 91 474 - -
Dere04g0993 513 Pfam Transmembrane amino acid transporter protein 85 478 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0993 Dere-ChrDere04 10509421 10514513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0993 49 512 Organic Solute Cotransporters AT1G77690 87.633 0.0 833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0993 04 10509421 10514513 Dere04g0993 04 10509421 10514513 ECH