Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0986 ATGCATCCTTTTTGCTGCGTCTCCGCCGTTTCTGATCAGTCTTCCCCAGTCAAACCCTCTCCTACTCCCTTCCCTAACTTCAATATGCCTCCTCTTCCCCCTGCCGCCTCTGCCGCTGTCATTCGATCCGATTCGATTTCCCGCCCCAATAACCACCACCACTCTCATAGTAATCACAGCTTCAGCGAGTATGGGCGGCTGAGTCAGCGGGAGCAGCAGCAACCTGTGGTGGACGTGAAGATCAATGACTTGGTTGGGAATGGAATCTCGGGGATATTGTACAAGTGGGTCAATTACGGCAAAGGCTGGAGGCCTCGATGGTTCGTCCTTCAAGATGGCGTACTTTCGTACTATAAGATTCACGGGCCCGATAAGATCATCGTCAATTACGAAACCGAGAAGGGGTCCAAGGTTATTGGCGAAGAATCCATGCGAAGGATCTCTCGTGACCGCAATTCTTATTCCCATCACCAGCACTCACGAAAGCCCTTTGGGGAAATCCATCTGAAGGTCTCGACTATTCGCGAAAGCAGATCAGATGACAAGCGCTTTTCAATTTTCACTGGAACAAAGAGGCTCCACTTAAGGGCCGAGACACGGGAAGATCGAGTAGCATGGGTGGAGGCATTGCAGGCAGTGAAAGATATGTTCCCCCGAATGTCCAACAGTGAGCTGATGGCTCCGTTAGACTATCTAACGATTTCAACTGACAAGCTGAGACATCGGCTACTGGAAGAAGGTGTAAGTGAGGCAGCCATTCTAGACAGTGAGCAAATTATGAGAAGTGAATTTGCAGCGCTACAAAACCAGCTTGTGCTGCTGAAGCAGAAGCAATTGATCCTGATAGACACATTACGACAGTTAGAGACAGAAAAAGTTGATCTGGAGAATACTGTCGTTGATGAGAGCCAAAGACAGTTGAATGATCAAGAGGCTTTCTCCAGATTAAAGCAGGAAAAATTCAGTGAAGGAAGTGCAAGTGAATCTGAGGATGAAAATGAGAGAAATGATGCTGCTGAGGAAGAAACAGAAGATGATGACAATGCCTTTTTTGACACTCGTGACTTTCTATCATCCAGTTCTTTTAAAAGTAATGGGTCTGATTATAGGGTTTCATCTTTTTCTTCAGACGATGAAGGGATCTATGTGATTGAATCAGAGGAGGATGTAGACCCTTCAATTAGATCAGTTGGAACCAGCTATCCTTATGTAAAGCGGCGTAAGAAATTGCCTGACCCTATTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGAAAGGATCTAACGAAAGTATGTCTTCCTGTTTATTTCAACGAGCCTATTTCCTCTCTCCAAAAGTGTTTTGAAGAAATGGAGTACTCGTATCTCTTGGATCGAGCATATGAATGGGGAAGAAGGGGTAACGGCCTCATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGGCTATGCTTCAACTGAAGGAAGAATTTGTAAGCCGTTTAATCCATTGCTAGGGGAAACATATGAAGCCGATTATCCTGATAAAGGCCTTCGTTTTTTCTCAGAGAAGGTTAGTCATCACCCTATGATAGTTGCGTGTCACTGTCAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTGTTGGCATTTTGACTTTGGAATTTGATGATGGGGAAGTTTTTCAGTGGAGTAAGGTCACAACATCAATATACAATCTCATACTCGGGAAGCTGTACTGTGATCACTATGGTACAATGCGTATACAGGGAAATGGAGATTACTCGTGTAAACTGAAATTCAAGGAGCAATCCATAATTGATCGAAATCCTCACCAGGTACATGGTATAGTTCAAGATAAGAATGGAAAAACAGTGGCAACTCTATTTGGAAAATGGGATGAAAGCATGCATTATGTTAATGGAGACTGTGCTGGGAAGGGAAAAGGTTATGACTCTCTGTCAGAAGCCCAAGTATTATGGAAGCGGAGCAAGCCTCCAAAGTTTCCAACTAGATATAATTTCACTCGCTTTGCCATCGCGTTAAATGAACTTATCCCTGGTCTGAAGCAAAAGTTGCCACCAACAGACTCCAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTATGAAATGGCAAATTCCGAAAAGTTACGGCTAGAGCAGCGGCAACGTCAGGCGCGGAAGATGCAGGAGAGCGGCTGGAAGCCACGGTGGTTCACCTTAGACAAAGCAAGCGGGACATACCGCTATTTGGGAGGGTATTGGGAGGCCAGGGAACGAGGAAATTGGGACTCTTGCCCTGACATTTTTGGTCAAATTTCTTCCGATCATCTTTCTGATTGA 2394 0.4482 MHPFCCVSAVSDQSSPVKPSPTPFPNFNMPPLPPAASAAVIRSDSISRPNNHHHSHSNHSFSEYGRLSQREQQQPVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNYETEKGSKVIGEESMRRISRDRNSYSHHQHSRKPFGEIHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRMSNSELMAPLDYLTISTDKLRHRLLEEGVSEAAILDSEQIMRSEFAALQNQLVLLKQKQLILIDTLRQLETEKVDLENTVVDESQRQLNDQEAFSRLKQEKFSEGSASESEDENERNDAAEEETEDDDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDDEGIYVIESEEDVDPSIRSVGTSYPYVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPISSLQKCFEEMEYSYLLDRAYEWGRRGNGLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNGDYSCKLKFKEQSIIDRNPHQVHGIVQDKNGKTVATLFGKWDESMHYVNGDCAGKGKGYDSLSEAQVLWKRSKPPKFPTRYNFTRFAIALNELIPGLKQKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWKPRWFTLDKASGTYRYLGGYWEARERGNWDSCPDIFGQISSDHLSD 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0986 797 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 88 775 IPR000648 GO:0008289
Dere04g0986 797 Gene3D - 507 682 - -
Dere04g0986 797 Gene3D - 87 217 IPR011993 -
Dere04g0986 797 Gene3D - 718 778 - -
Dere04g0986 797 CDD PH_ORP_plant 89 222 - -
Dere04g0986 797 SUPERFAMILY Oxysterol-binding protein-like 416 791 IPR037239 -
Dere04g0986 797 MobiDBLite consensus disorder prediction 46 69 - -
Dere04g0986 797 FunFam oxysterol-binding protein-related protein 1D isoform X1 507 679 - -
Dere04g0986 797 MobiDBLite consensus disorder prediction 333 349 - -
Dere04g0986 797 SUPERFAMILY PH domain-like 89 215 - -
Dere04g0986 797 Coils Coil 285 305 - -
Dere04g0986 797 ProSiteProfiles PH domain profile. 86 215 IPR001849 -
Dere04g0986 797 MobiDBLite consensus disorder prediction 312 332 - -
Dere04g0986 797 Coils Coil 726 746 - -
Dere04g0986 797 MobiDBLite consensus disorder prediction 311 350 - -
Dere04g0986 797 Pfam Pleckstrin homology domain 94 211 - -
Dere04g0986 797 SMART PH_update 87 217 IPR001849 -
Dere04g0986 797 FunFam Oxysterol-binding protein-related protein 2A 718 789 - -
Dere04g0986 797 Pfam Oxysterol-binding protein 421 776 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0986 Dere-ChrDere04 10454582 10460608 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0986 04 10454582 10460608 Dere04g0986 04 10454582 10460608 ECH