Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0931 ATGAGCATGGTGGGATGCTTTGAAGATTCCCGTGTAATAAACTCTACGCATTTTTGCATTGCCTCCTCCTCGTTTTCCTCGCCACGCCTATATAAGCAGAGTATGGCTGCTGAAGTATGTCATCAGGCTATTGGGACTTTTCAATCTCATTCGTTTCTTAAAAATTCAAAAAATCAACAAATTCTTCAGAAGAACTCAATAAGATTGATAACAAAGGATTTCACCAGCTGTAATGGCTTGTCAAGGAGAGCTGGCCAGAGGAATGGTAGCGTAATCCGATCTTCAGCTTCTCAAACATCAGTGGTTGATCCAGTGTTATCCCCTTCAAGAAGCAGCACCAGTGACACTTCCAAGAAATCAAATGAAGCAGCTTTGATCCTTATTCGACATGGTGAATCATTATGGAATGAAAAGAATTTATTCACAGGTTGTGTAGATGTCCCACTAAGCAACAAGGGCATTGATGAGGCAATTGAAGCTGGCAAAAGAATCAGCAGCATTCCTGTTGATGTTATATTTACATCTGCTCTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCATCGTAGAAGGAAGGTGCCTATCGTTATACACAATGAGAGTGAACGAGCAAGGGCATGGAGCCAAATTTTTAGTGAAGATACAAAAAAGCAATCCATTCCAGTCATAACAGCATGGCAACTAAATGAAAGAATGTATGGAGAGCTCCAGGGTCTTAATAAGCAGGAAACAGCTGACAGATATGGGAAAGAACAAGTCCATGAATGGCGCCGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCTTATTTTAGAGAGCAGATTGAACCCCAGCTTTCATCTGGAAAGAATGTTATGATTGCTGCACATGGGAATTCCTTGAGATCCATTATCATGTATCTTGACAAATTAACTTCCCAAGAGGTCATTAGTTTGGAATTGTCAACTGGAATTCCCATGCTTTATATTTTTAAAGAAGGAAGATTCATTAGGAGGGGAAGTCCCATAGGACCAACTGAAGCTGGAGTTTATGCATATACTAGGCTCTTGAATTTAGTGTCATCACTTAAAGATGCTAAACCATGAGTTTGGCTCTTTACAGGCAGAAGTTGGATGATATGTACTAAAAGTACAGATGATGGGAATGTATTCTCCATTATCAGCAGCATCACAGCTGAATCACTTAAAAAAAGGGGGAGGAGTTGGGGGTGGGGGAAGATGTTTATCAGTGTTACTATTAGATAA 1284 0.4073 MSMVGCFEDSRVINSTHFCIASSSFSSPRLYKQSMAAEVCHQAIGTFQSHSFLKNSKNQQILQKNSIRLITKDFTSCNGLSRRAGQRNGSVIRSSASQTSVVDPVLSPSRSSTSDTSKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSNKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPIVIHNESERARAWSQIFSEDTKKQSIPVITAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFREQIEPQLSSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTRLLNLVSSLKDAKPXVWLFTGRSWMICTKSTDDGNVFSIISSITAESLKKRGRSWGWGKMFISVTIR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0931 427 Gene3D - 114 348 IPR029033 -
Dere04g0931 427 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 127 136 IPR001345 GO:0003824
Dere04g0931 427 SMART PGAM_5 124 310 IPR013078 -
Dere04g0931 427 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 122 349 IPR005952 GO:0006096|GO:0016868
Dere04g0931 427 PANTHER PHOSPHOGLYCERATE MUTASE 115 361 IPR005952 GO:0006096|GO:0016868
Dere04g0931 427 CDD HP_PGM_like 125 344 IPR013078 -
Dere04g0931 427 Pfam Histidine phosphatase superfamily (branch 1) 195 328 IPR013078 -
Dere04g0931 427 SUPERFAMILY Phosphoglycerate mutase-like 125 341 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0931 Dere-ChrDere04 9768256 9773385 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0931 04 9768256 9773385 Dere04g0931 04 9768256 9773385 ECH