Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0928 ATGGCGGTGTCACTCATTATCTTTGTCTGCTTGCTGGTGCTCGGTGAAGGGGTCGTGAATGGCGAGTTAACTCAGGCACAGCCCCCTTTTGCCTGTGACTGGTCCAACCCTGCCTCCAGATCCTACCCATTTTGCAATCCCAAGCTTAGCGTGAGTCGAAGAGCCAAAGATCTAGTGTCTCGCCTCACACTGGACGAGAAGCTCGCCCAACTCGTTAACTCCGCCCCTCCCATTCCCAGACTGGGCATCCCCGCCTACCAGTGGTGGAACGAAGCATTACATGGAGTCGCCAACGTCGGACGCGGCATTCGATTTAATGGCTCCATTACTTCCGCCACTAGCTTCCCTCAAGTCATCCTCTCTGCTGCTACCTTCGACTCCCACCTCTGGTACCGAATCGGTCAGGCCATTGGAAGGGAAGCGCGAGCAGTCTATAATGCCGGGCAAGCTATGGGCATGACATTCTGGGCTCCGAACATTAACATCTTCAGGGACCCTAGATGGGGGAGAGGGCAAGAGACAGCTGGGGAAGACCCACTGGTTACTGCCAAGTATGCGGTGTCGTATGTGAGGGGGGTTCAAGGGGATTCCTTCCAGGGAGGCAAACTCAGAGGTCATCTTCAAGCTTCCGCTTGTTGCAAACATTTCACGGCCTACGATTTGGACAACTGGAAGGGTGTAAATCGCTTTATCTTCGATGCTCGCGTCACTATGCAAGATTTAGCGGACACATATCAGCCCCCATTTCAGAGCTGCGTAGAGCAAGGACGAGCAAGTGGGATAATGTGTGCTTACAACCGTGTGAATGGGGTTCCAAACTGCGCAGATTTCAATCTCTTAACTAAAATTGCTAGGAAACAATGGGATTTTCATGGGTATATCACTTCGGATTGTGGGGCAGTAGCAATCATTCACGATGAACAAGGATATGCAAAATCACCGGAAGATGCTGTAGCAGATGTCCTTCGGGCTGGTATGGATGTAGAGTGCGGTGATTACTTGACGAAGTATGCTAAAACAGCAGTGCAGCAGAGAAAACTGGCAATATCCCAAGTAGATCGTGCACTTCACAACCTATTCTCCATTAGAATAAGGCTGGGTCTTTTTGATGGAAATCCAGCCAAACTCTCATTCGGCATGATCGGTCCCAATCAAGTGTGTTCAAAAGAGCACCTCTATTTAGCCCTTGAAGCTGCCAGAAATGGCATAGTCCTTATGAAGAACGCTGCCAGACTTCTCCCACTCCCTAAAACAGAACCCTCTATTTCCCTTGCAGTCATAGGCCCCAACGCCAATGCTTCCCCTCTAACTCTTTTGGGAAACTATGCAGGCCCTCCCTGTAAATTGTTGACGCCATTGCAGGCCTTTCAGCACTATGTTAAGAACACCATCTATCACCCGGGTTGTGATGGTGGAGTAAAGTGTCCTACGGCTCAGATAGACCAAGCCGTGGAACTTGCTAAAAGGGTGGATTATGTGGTGCTGGTTATGGGATTGGATCAAAGTCAAGAGAGAGAAGATCGTGATCGGGTTCACCTAGACTTACCAGGTAAGCAGCTGGAACTCATCGACAGTGTTGCTAAAGCTTCCAAGAGACCAGTCATTTTGGTGCTCTTTTGTGGAGGCCCTCTGGATATTTCTTCAGCTAAGTATGACAACAAAATTGGAGGCATCTTCTGGGCTGGTTATCCAGGAGAAGTTGGAGGAATCGCACTTGCTCAGATTATCTTTGGTGATCATAACCCAGGAGGAAGACTACCGGTCACTTGGTACCCAAAAGATTTCATTAGAGTGCCAATGACAGACATGAGGATGCGAGCTGATCCATCATCTGGCTATCCTGGAAGGACTTACCGATTTTACACAGGTCCGAAAGTGTACGAGTTCGGCTACGGCCTAAGCTACTCTACATATTCCTACGAGTTCGTCTCTGTCACGTACAAGAAGCTTCACTTCAATCAATCATTGTCTCATTTGCTGGTTGAAAATTCGGAAACCATCCGTTTCAAATCAGTATCAGAGTTGGGTGCAGAAACTTGCCAAAGCATGTCAGTGTCAGTCACCGTGGGAGTTAAAAATCATGGAAGTATGGTGGGGAGGCATTCGGTATTGCTATTCACAAGGCATGCAAAAAGGAGAAATGGAAATCCGATCAAACAGTTGTTGGGTTTTGAGAGTGTGATGTTGGATGCAGGGGAAAGGGCACAGGTTGGATTTGAGCTAAGCCCTTGTGAGCACCTTAGCAGAGCAAACGAGGCTGGTTCGAAAGTAATTGAAGAAGGGTCCCATTTGTTGATTGTGGGGGATCAGGAGTATCCAATTGATATCATTTTCTGA 2337 0.4844 MAVSLIIFVCLLVLGEGVVNGELTQAQPPFACDWSNPASRSYPFCNPKLSVSRRAKDLVSRLTLDEKLAQLVNSAPPIPRLGIPAYQWWNEALHGVANVGRGIRFNGSITSATSFPQVILSAATFDSHLWYRIGQAIGREARAVYNAGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPLVTAKYAVSYVRGVQGDSFQGGKLRGHLQASACCKHFTAYDLDNWKGVNRFIFDARVTMQDLADTYQPPFQSCVEQGRASGIMCAYNRVNGVPNCADFNLLTKIARKQWDFHGYITSDCGAVAIIHDEQGYAKSPEDAVADVLRAGMDVECGDYLTKYAKTAVQQRKLAISQVDRALHNLFSIRIRLGLFDGNPAKLSFGMIGPNQVCSKEHLYLALEAARNGIVLMKNAARLLPLPKTEPSISLAVIGPNANASPLTLLGNYAGPPCKLLTPLQAFQHYVKNTIYHPGCDGGVKCPTAQIDQAVELAKRVDYVVLVMGLDQSQEREDRDRVHLDLPGKQLELIDSVAKASKRPVILVLFCGGPLDISSAKYDNKIGGIFWAGYPGEVGGIALAQIIFGDHNPGGRLPVTWYPKDFIRVPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSTYSYEFVSVTYKKLHFNQSLSHLLVENSETIRFKSVSELGAETCQSMSVSVTVGVKNHGSMVGRHSVLLFTRHAKRRNGNPIKQLLGFESVMLDAGERAQVGFELSPCEHLSRANEAGSKVIEEGSHLLIVGDQEYPIDIIF 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0928 778 PRINTS Glycosyl hydrolase family 3 signature 115 134 IPR001764 GO:0004553|GO:0005975
Dere04g0928 778 PRINTS Glycosyl hydrolase family 3 signature 283 301 IPR001764 GO:0004553|GO:0005975
Dere04g0928 778 PRINTS Glycosyl hydrolase family 3 signature 209 225 IPR001764 GO:0004553|GO:0005975
Dere04g0928 778 SMART Fn3_like_2 701 771 IPR026891 -
Dere04g0928 778 Gene3D - 388 637 IPR036881 GO:0004553|GO:0005975
Dere04g0928 778 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 403 638 IPR036881 GO:0004553|GO:0005975
Dere04g0928 778 SUPERFAMILY (Trans)glycosidases 42 401 IPR017853 -
Dere04g0928 778 Gene3D - 54 377 IPR036962 GO:0004553|GO:0005975
Dere04g0928 778 Gene3D Immunoglobulins 664 776 IPR013783 -
Dere04g0928 778 FunFam probable beta-D-xylosidase 7 54 375 - -
Dere04g0928 778 FunFam probable beta-D-xylosidase 2 388 636 - -
Dere04g0928 778 Pfam Glycosyl hydrolase family 3 C-terminal domain 403 635 IPR002772 GO:0004553|GO:0005975
Dere04g0928 778 Pfam Fibronectin type III-like domain 702 770 IPR026891 -
Dere04g0928 778 PANTHER SUGAR HYDROLASE-RELATED 19 774 IPR044993 GO:0009044|GO:0045493
Dere04g0928 778 Pfam Glycosyl hydrolase family 3 N terminal domain 109 359 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0928 Dere-ChrDere04 9758540 9763084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0928 18 774 Glycoside Hydrolase AT1G78060 64.868 0.0 1031
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0928 04 9758540 9763084 Dere04g0928 04 9758540 9763084 ECH