Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0881 ATGTCTATCTCCACTACTAACTCTCTCATTCCCAACAAATCCTTAATTCCCACCCGTTCGCTTGTTCCTTCCCCCAAACTCAACCAATCTTCCTTCCCCAATAAGCCCAGGCCTACCCCTTCTTTTCTGGCCGTTCATGCGGCCGAACCAGCCAAGAATCCCGTCGCCTCCGGTAAGCCGGAAGTGACAGCCGCCACTTCTGTGTCTTCTTCAGCTGCAACGACGACTACGACTCGTAATGCGGGTCAGGCAAAATGGAGCCTGGGCAGTTGGAAATCCAAGAAGGCTCTTCAGCTGCCCGAATACCCGAATCAAGAGGAGCTGGAATCGGTGCTTCGGACTCTCGATGCGTTCCCTCCTATCGTGTTTGCTGGAGAGGCAAGGAGCTTGGAGGAACGTCTGGGTGAGGCTGCCATGGGAAATGCTTTTCTTCTGCAGGGTGGAGATTGTGCTGAGAGCTTTAAGGAATTCAATGCCAATAACATTCGCGACACCTTCAGAATTCTTCTCCAGATGAGCGTTGTTATGATGTTCGGAGGCCAAATGCCCGTCATTAAGGTGGGAAGGATGGCAGGTCAATTTGCAAAACCCAGATCGGAACCATTAGAGGAGAAAAACGGCGTGAAGCTGCCAAGTTACCGAGGAGATAATGTGAACGGAGACTCTTTTGATGAGAAGTCGAGAATTCCGGATCCCCAAAGGATGATAAGAGCGTACTGTCAATCGGCAGCCACTTTGAACCTTCTTAGAGCTTTTGCGACCGGAGGTTATGCTGCTATGCAAAGGGTAACTCAATGGAATTTGGACTTCACAGAGCATAGCGAGCAGGGAGACAGGTACCGAGAGCTGGCTCACCGAGTTGATGAGGCCCTTGGATTCATGGCTGCAGCGGGGTTGACTGTGGACCATCCTATAATGAAAACAACTGAGTTCTGGACTTCTCATGAATGCTTGCTATTGCCATATGAACAATCACTCACTAGGTTGGATTCAACTTCTGGCCTCTACTACGACTGCTCTGCTCATATGCTATGGGTTGGGGAACGGACCAGGCAGCTAGATGGTGCCCATGTTGAGTTTCTAAGAGGAGTTGCTAATCCTCTTGGGATTAAGGTAAGTGATAAGATGGATCCAAATGAACTTGTTAAACTCATTGAGATCTTGAATCCCCAAAACAAACCGGGAAGAATAACTGTGATCACGAGGATGGGAGCTGAAAATATGAGAGTAAAGCTTCCACATTTAATCAGGGCAGTTCGCAGAGCAGGGCAAATTGTCACATGGGTCAGCGATCCTATGCATGGAAACACCATAAAGGCTCCTTGTGGTCTTAAAACCCGACCCTTTGATGCCATCAGGGCGGAGGTGAGGGCATTCTTCGATGTGCACGAACAAGAAGGAAGCCAGCCAGGAGGAGTTCATCTAGAGATGACGGGCCAGAATGTGACGGAGTGCATTGGTGGGTCAAGGACGGTCACCTTTGACGACCTGAGCTCACGTTATCACACACACTGTGACCCTAGGCTCAATGCTTCACAATCTCTTGAGCTTGCCTTCATCATCGCTGAACGTCTCAGAAAGAGCAGGATCAGATCGCAGAAGCCTCTTGCCTCCGTAGGGCTGTAA 1626 0.4975 MSISTTNSLIPNKSLIPTRSLVPSPKLNQSSFPNKPRPTPSFLAVHAAEPAKNPVASGKPEVTAATSVSSSAATTTTTRNAGQAKWSLGSWKSKKALQLPEYPNQEELESVLRTLDAFPPIVFAGEARSLEERLGEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEPLEEKNGVKLPSYRGDNVNGDSFDEKSRIPDPQRMIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSQPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRIRSQKPLASVGL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0881 541 Gene3D Aldolase class I 119 284 IPR013785 -
Dere04g0881 541 Gene3D Aldolase class I 285 527 IPR013785 -
Dere04g0881 541 MobiDBLite consensus disorder prediction 15 83 - -
Dere04g0881 541 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 275 527 - -
Dere04g0881 541 Pfam Class-II DAHP synthetase family 86 522 IPR002480 GO:0003849|GO:0009073
Dere04g0881 541 MobiDBLite consensus disorder prediction 60 83 - -
Dere04g0881 541 SUPERFAMILY Aldolase 78 526 - -
Dere04g0881 541 MobiDBLite consensus disorder prediction 15 37 - -
Dere04g0881 541 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 63 535 IPR002480 GO:0003849|GO:0009073
Dere04g0881 541 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 86 528 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0881 Dere-ChrDere04 9318116 9321811 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0881 04 9318116 9321811 Dere04g0881 04 9318116 9321811 ECH