Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0872 ATGCGCACCAGGCAAGCACATTCAATTCAGACTTTCAGAATGGGGCATTGCAGGCTTTGAAATTCTCTGCATCTTCATATTCTCCTGCTTCCTTGTCAGGATATATTGTGCCCTGCTCCGCTTCACTGTAAACGACCTTATCATTTCATGGCGCTTCGTTTTGAGGTTCTTGGCAGGTTCAATCGTGCTCGTGCAGCTCGATTAACACTCCCTCACTATGTGTGCCAGACGCCTTTATTTATGCCAGTGGGTACACAAGGAACAATTAAAGGACTGACAACAAGCCAGCTTGAGGAGATCGGTTGCCAAATAATACTTGGAAATACATACCACTTGGCACTTCGACCTACTTCTGAGCTTCTTGATGAAGTAGGCGGTCTGCACAAATTTATGAATTGGCCGCGGGCTCTACTTACAGATTCTGGTGGCTTTCAAATGGTATCACTATTGCATCTTGCTGATATTACAGAAAAAGGTGTGACATTTCAGTCACCAGTTGATGGAAAGCCAATGCTCCTAACGCCTGAGGAGTCTATTCAAATCCAAAATAGAATTGGAGCAGATATTATTATGGCTCTTGATGATGTTGTAAGGACCACTATTACTGGTCCACGAATAGAGGAAGCCATGTATCGAACACTTAGATGGATAGACAGATGTATAGCAGCTCACAAGAGACCACATGAGCAGAACTTATTTGGTATTGTACAAGGTGGTTTAGATCCTGTGTTGAGGGATATATGTGTCAGAGGCTTGGTGGATCGCAATTTACCGGGCTATGCTATTGGTGGTCTTGCGGGTGGTGAAGACAAAGATTCATTTTGGCGTGTTGTTGCTCAGTGCACTGCAGCTTTACCCGAAGATAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGATATAGTTGTTTGTAGTGCTTTGGGCGCTGACATGTATGATTGTGTTTATCCAACCCGTACTGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTACTGAAACTAAAACACAGAGCGATGGCTGATGATACTCGTCCCATTGATACTACCTGCTCTTGTATGGTTTGCAAGAACTACACCAGGGCTTACATCCATTGCCTTGTGTCAAAAGATGCTATGGGGTCTCAGCTTCTGTCATATCATAATTTATATTACATAATGCAGCTCAGTAGGGACCTGCACTCATCAATTATCGAGGGAAGGTTCCCAAAGTTTGTATGTGACTTCCTGCATAAAATGTTCCCGAAAGGTGATGTTCCTGAATGGGTCTGCAATGCTATGGAGGTGGCTGGAATTGACATTTCTTCCTGCTGTGCTCCGTTCTCTTCATACCAAGATGACGGTTCTGAAAATTGTTTCAGGAAAGAAATTAACGAGGTGAAATTGAAAGCAGACAGACTTTGA 1407 0.4378 MRTRQAHSIQTFRMGHCRLXNSLHLHILLLPCQDILCPAPLHCKRPYHFMALRFEVLGRFNRARAARLTLPHYVCQTPLFMPVGTQGTIKGLTTSQLEEIGCQIILGNTYHLALRPTSELLDEVGGLHKFMNWPRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVRTTITGPRIEEAMYRTLRWIDRCIAAHKRPHEQNLFGIVQGGLDPVLRDICVRGLVDRNLPGYAIGGLAGGEDKDSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPIDTTCSCMVCKNYTRAYIHCLVSKDAMGSQLLSYHNLYYIMQLSRDLHSSIIEGRFPKFVCDFLHKMFPKGDVPEWVCNAMEVAGIDISSCCAPFSSYQDDGSENCFRKEINEVKLKADRL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0872 468 SUPERFAMILY tRNA-guanine transglycosylase 49 413 IPR036511 GO:0006400|GO:0016763
Dere04g0872 468 Gene3D - 49 416 IPR036511 GO:0006400|GO:0016763
Dere04g0872 468 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 50 438 - -
Dere04g0872 468 NCBIfam tRNA-guanine transglycosylase 54 414 IPR002616 GO:0006400|GO:0016763
Dere04g0872 468 NCBIfam tRNA guanosine(34) transglycosylase Tgt 54 414 IPR004803 GO:0008479|GO:0101030
Dere04g0872 468 Hamap Queuine tRNA-ribosyltransferase [tgt]. 52 413 IPR004803 GO:0008479|GO:0101030
Dere04g0872 468 Pfam Queuine tRNA-ribosyltransferase 62 414 IPR002616 GO:0006400|GO:0016763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0872 04 8970607 8992255 Dere04g0872 04 8970607 8992255 ECH