Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0838 ATGAAACTGAAAGACCACCCGCCCAGCCTAGGAGTATTGGCTTTCGCAATCATTGATTGCGATGGTCAAGGAGAGTCAATGGTGGCACTTGATTTTGGTATAAAGGGAACACGACTGCCTAAACGCCTCACGTGGTATTCGCCTTCCAATATCAGCGGTGGAACCCACAAATTACACAGGCGTTGGCGTGGCTTGGAAGCGGGGCCACGTGTCAGCAGGAAGTACGGGTCGCTAATTGAGAATGAGAAGGAATCAAACAACACAGGAGACACGGGCGTGGAAGAATGCTGGGAAATTACCAAGAAAACCCTGGACCCTTGCAGTCCGTCGTCCACGTTTTCCCTCCATCACGATATGACTAACAAAACACCGGAAGCGTCTCAGGGAGATGGCGGAGCTTCTCTACCCTCTTCTCAGCCTGGGCCACCAGAGCATGAGCGTTCGCGTGGCAGCAACGGCAATACGATTATCAAGAGTGGGCCACTTTCCATATCTTCAAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTAACACGCACTTCATTGGTTTTCTTCAGAAGTGATCCAAGTGTTGCTCCCCAGAAAGGAGGTGAAGTGAATTTAACTCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTGACTGTGCTTTTTCCTGATGGACATGATGGACGAGCTTTCACACTTAAGGCTGACACTACAGAGGATTTATATGAGTGGAAGACTGCACTTGAGAGTGCTTTGGCACAAGCCCCGAGTGCCTCTGATGTAATGGGGCAAAATGGTATCTTCAGGAACGATCAGATTGATTCAATTGATATTTCTTTGGACCAGTCGAAGGATGTGGAACCAGTTAAATCCACTGTCATTGGCCGGCCAATTTTACTTGCTCTGGAGGAGGTTGATGGAGCTCCATCTTTTTTGGAGAAAGCCCTCAGGTTCATTGAAGAGCATGGAGTCAAAGTTGAAGGGATCTTGCGACAAGCAGCTGATGTTGATGATGTTGAACATCGAGTTCGGGAATATGAACAAGGAAAAAATGAATTCTCTGCAGAGGAGGATGCACATGTTGTTGCTGATTGTTTAAAGGCTGGGTGGGTTGGAGGCCAGGCCAAAATTGACATTCTTATTCCAAACACTCAATGAACTGAACGTGCTGGTAGGATTTCTGCTATCCGTGCAGCAATATGTGACACTTTCCCTGAACCAAATCGTCGTTTATTGCAAAGAATACTCCAAATGATGCAAACTGTGGCTTCCCACAAAGCTGTGAATAGGATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGTCCCCTTCTAGCCGGGGAATGTGAGATTGAAAATGATTTTGATGTGGGTGGTGATGGTTCTGTTCAACTTCTACAAGCAGCTGCTGCAGCTAACCATGCTCAAACAATTGTTATAACTTTATTAGAAGAATATGACAGCATATTTGGGGAGGAAGGAACCATGTCCCCAGGTATATACACTGACTCAGAGGAAAGTGGATCTGGGAGTGAGGAGGCTACTGAAGATGACGAGTCCTATGATGATGATGACGATGAAGATGATTATGACGATGAATGTGATGAAGATTCAATACAAGAGTCTGATGTAGATACAGAGTGCAGCGAGACTGAGGACTTGGAAGGCAAGGATGATAAGAACCATGACCGTTCTAGGTCAGATGTAAAATCCTCAGGTGTGAATGAAGATCCTAAAGTCAATGAGATGTCATTAAAGTCTAGTGAAGTCTCACTGCCTCAGCCCGAGGACATCCAAAGCAGTGAAAATCTGATGAGTTCAACCAAGACTGCATGTGCAGAAAAGTCTGATGTGCCTGCTGACATAGTTGAAGGTGTTTCCACAGACCAAACTATAGCGCATAATTCAAGTTGTCCTACTGACAACAAATTGATAGACATATCCAATGGTCCAGCATCTGCTCTGAGCCACACTGTATTGGGGCGTACCTCTGCAATGAAGAACCTGACCATGGAACCTATTGATAATTCTACTGATGAAGCTGAAATTGAGACTCTTGAAGCTATGAAGGCAGAGTTGCAAAACCAAATTGCAGAGGAGGCTAAAGCAAACCTGCAATCTTATCTGGAAAAACAAAAGAAAGCCATGCATGAGCGTCGTCTAGCTCTTGAGCAAGATGTGGCTAGACTACGGCAACAGCTGCAAATGGAGAAGAATTCTTGGGCAACTCTTGAAGCAGGAGTCAAGTATACTCCTGGATCCTTAACTGATTTAGTCAGTATTGATGAAAAGACCAAGGCAGATCTTGAGGAATTAGCTCTGGTAGAAGCAGATCTCACCAAGTTACGGCAGCGAATAGATGATATTGGTGTGCGGTCGAATTTACATCGTGAACAGAGTTCAAATCATGAACCAAAATTGAAAAACAAGCTCGATACTGAAGTTGTAGCCACTTCGCAGTTGGAAAAGTCAAGAAGTAAGGACACTCATTTTGGTGTAGCCGAAAGTGAGAATGAGAAAAAGCTGGAACCAACAACTTTACTAAACAAATATCCACCTCAAGTTATTTCCAAAAAATCTGGTGCAAAGGTTGAGCAACAGGTAGCAAACTTCACTACTTCTACGCTGACAAAACTGTCAACCAGACTAAACTTTTTGAAGGAGCGTCGAGGTCAATTTCAGCAATCACAGCCATCACCCAGTAGTAAGTCTCGAGGATCTGAGACGCATTCTGTATCAAACCCAGAGAAGGGTAGAGCCACGGAAAGTTCCCAGCCATCCCAGATTCCAGATAGAGGTCCAGGCAAAGAAGCTCAATCGCTCCAAAATTCAGACAAATTGAGAAAATCAGATAGTCAATTAATCCATCACTCAGATAAATGGAATCAAAATCAACAATCCTTGGAAAGAGGAAGGTCGGAAAGCCATCAGTCTTATAATGTGGATAAAGGTCGATGA 2997 0.4451 MKLKDHPPSLGVLAFAIIDCDGQGESMVALDFGIKGTRLPKRLTWYSPSNISGGTHKLHRRWRGLEAGPRVSRKYGSLIENEKESNNTGDTGVEECWEITKKTLDPCSPSSTFSLHHDMTNKTPEASQGDGGASLPSSQPGPPEHERSRGSNGNTIIKSGPLSISSKGIGWTSWKKRWFILTRTSLVFFRSDPSVAPQKGGEVNLTLGGIDLNNSGSVVVKADKKLLTVLFPDGHDGRAFTLKADTTEDLYEWKTALESALAQAPSASDVMGQNGIFRNDQIDSIDISLDQSKDVEPVKSTVIGRPILLALEEVDGAPSFLEKALRFIEEHGVKVEGILRQAADVDDVEHRVREYEQGKNEFSAEEDAHVVADCLKAGWVGGQAKIDILIPNTQXTERAGRISAIRAAICDTFPEPNRRLLQRILQMMQTVASHKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSVQLLQAAAAANHAQTIVITLLEEYDSIFGEEGTMSPGIYTDSEESGSGSEEATEDDESYDDDDDEDDYDDECDEDSIQESDVDTECSETEDLEGKDDKNHDRSRSDVKSSGVNEDPKVNEMSLKSSEVSLPQPEDIQSSENLMSSTKTACAEKSDVPADIVEGVSTDQTIAHNSSCPTDNKLIDISNGPASALSHTVLGRTSAMKNLTMEPIDNSTDEAEIETLEAMKAELQNQIAEEAKANLQSYLEKQKKAMHERRLALEQDVARLRQQLQMEKNSWATLEAGVKYTPGSLTDLVSIDEKTKADLEELALVEADLTKLRQRIDDIGVRSNLHREQSSNHEPKLKNKLDTEVVATSQLEKSRSKDTHFGVAESENEKKLEPTTLLNKYPPQVISKKSGAKVEQQVANFTTSTLTKLSTRLNFLKERRGQFQQSQPSPSSKSRGSETHSVSNPEKGRATESSQPSQIPDRGPGKEAQSLQNSDKLRKSDSQLIHHSDKWNQNQQSLERGRSESHQSYNVDKGR 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0838 998 Pfam PH domain 157 261 IPR001849 -
Dere04g0838 998 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 134 854 - -
Dere04g0838 998 Pfam Leucine-zipper of ternary complex factor MIP1 729 802 IPR025757 -
Dere04g0838 998 CDD RhoGAP 318 451 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 597 626 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 110 159 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 144 159 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 895 998 - -
Dere04g0838 998 Gene3D - 144 263 IPR011993 -
Dere04g0838 998 Gene3D Rho GTPase activation protein 382 511 IPR008936 -
Dere04g0838 998 SMART PH_update 156 264 IPR001849 -
Dere04g0838 998 ProSiteProfiles Rho GTPase-activating proteins domain profile. 309 503 IPR000198 GO:0007165
Dere04g0838 998 MobiDBLite consensus disorder prediction 834 857 - -
Dere04g0838 998 Coils Coil 689 753 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 895 943 - -
Dere04g0838 998 Pfam RhoGAP domain 318 456 IPR000198 GO:0007165
Dere04g0838 998 SUPERFAMILY PH domain-like 123 262 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 522 565 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 970 987 - -
Dere04g0838 998 ProSiteProfiles PH domain profile. 155 262 IPR001849 -
Dere04g0838 998 SMART RhoGAP_3 315 500 IPR000198 GO:0007165
Dere04g0838 998 MobiDBLite consensus disorder prediction 505 629 - -
Dere04g0838 998 Coils Coil 345 365 - -
Dere04g0838 998 Gene3D Rho GTPase activation protein 287 379 IPR008936 -
Dere04g0838 998 SUPERFAMILY GTPase activation domain, GAP 317 505 IPR008936 -
Dere04g0838 998 CDD PH 158 257 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 566 588 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 834 859 - -
Dere04g0838 998 MobiDBLite consensus disorder prediction 110 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0838 Dere-ChrDere04 8608650 8624666 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0838 04 8608650 8624666 Dere04g0838 04 8608650 8624666 ECH