Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0836 ATGCACACCACACCATCCACCCCGACTTTCTTAAACATGGACGTTAAGTTCACCACCCTCCTCATTCTTTTCTCTGCAATTCTCCTCCTCGCCATTACCACCGCCATTGCCTTTGACCCCTGTGCTTCTCAGCCCCAGGACTTGGACCTCACCCTCATTCCCATATACTCCAAATGCTCGCCCTTCGACCCACCCAAGACAGACTCATGGGTCAACACGGTGATGACCATGGCCTCCAAAGACACCGAACGGCTCAACTACTTGTCCACCCTCCTGGCCAAGAAGCCCTCGACCTCTGTCCCGATTGCCTCGGGCCAAGCTTTCAATATCGGTAACTACGTGGTCCGAGCCAAACTCGGCACTCCCGGCCAGCTCATGTTCATGGTCCTAGACACCAGCAGCGATGAGGCCTGGGTCCCATGCTCCGGCTGTACGGGGTGCTCGGCCACCACTTTTTCACCCAAAGCTTCTACTACTTATGGGTCATTGGATTGCTCCGTTCCAAAGTGCAGTCAGGTCCGTGGATTCTCCTGCGCCGCCACAGGATCCGCACCGTGTTCGTTTAACCATTCCTACGCTGGTTCATCGTTCTCAGCAACGCTGGTCCAAGATTCTCTCAGACTGGCATCTGATGTTATCCCCAATTACGCTTTCGGCTGCATCAACAGCGTGTCTGGCGGTTCGATTCCCTCCCAAGGGCTTCTGGGTCTGGGTCGGGGACCCATGTCGTTATTGTCGCAATCCGGTTCACTCTACGCAGGAGTGTTCTCCTACTGCCTTCCCAGTTTCAAGTCGTATTACTTTTCTGGGTCACTGAAACTCGGACCCAGAGGTCAACCCAGGAGAATCCGTACCACCCCGCTCTTGCGTAACCCCCGCCGGCCGTCTCTGTACTACGTGAACTTGATCGGAGTCAGTGTGGGTCGGGTCCTCGTCCGAGTACCCAGTGAGCTCCTAAGTTTCAACCCGAATACCGGAGCTGGAACCATCATAGATTCGGGTACGGTGATAACCCGATTCGTGGAACCTGCGTATAATGCAATTAGGGACGAGTTCAGGAAACAGGTGAGAGGCCCTTTTTCGAGCGTGGGGGCATTTGACACTTGCTTTGTGAAGAGCTACGAGACATTGGCACCCGTCATTACATTGCACTTCTCGGGGTTGGATCTGAAATTGCCATTCGAGAACAGCTTGATACATAGCAGTTCGGGCTCACTGGCGTGCTTGGCAATGGCGGCCGCACCCAATAATGTAAACTCTGTGTTAAATGTGATAGCCAACTTGCAGCAGCAAAACCTTAGGATTTTGTTTGATACTGTCAAAAGTAGGGTTGGCATAGCCCGTGAGCTCTGTAACTAG 1359 0.5342 MHTTPSTPTFLNMDVKFTTLLILFSAILLLAITTAIAFDPCASQPQDLDLTLIPIYSKCSPFDPPKTDSWVNTVMTMASKDTERLNYLSTLLAKKPSTSVPIASGQAFNIGNYVVRAKLGTPGQLMFMVLDTSSDEAWVPCSGCTGCSATTFSPKASTTYGSLDCSVPKCSQVRGFSCAATGSAPCSFNHSYAGSSFSATLVQDSLRLASDVIPNYAFGCINSVSGGSIPSQGLLGLGRGPMSLLSQSGSLYAGVFSYCLPSFKSYYFSGSLKLGPRGQPRRIRTTPLLRNPRRPSLYYVNLIGVSVGRVLVRVPSELLSFNPNTGAGTIIDSGTVITRFVEPAYNAIRDEFRKQVRGPFSSVGAFDTCFVKSYETLAPVITLHFSGLDLKLPFENSLIHSSSGSLACLAMAAAPNNVNSVLNVIANLQQQNLRILFDTVKSRVGIARELCN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0836 452 Gene3D Acid Proteases 72 275 IPR021109 -
Dere04g0836 452 PANTHER ASPARTYL PROTEASES 37 445 IPR001461 GO:0004190|GO:0006508
Dere04g0836 452 Pfam Xylanase inhibitor C-terminal 298 447 IPR032799 -
Dere04g0836 452 FunFam aspartyl protease AED3 92 275 - -
Dere04g0836 452 ProSiteProfiles Peptidase family A1 domain profile. 113 447 IPR033121 -
Dere04g0836 452 Gene3D Acid Proteases 276 452 IPR021109 -
Dere04g0836 452 FunFam Aspartyl protease AED3 276 452 - -
Dere04g0836 452 SUPERFAMILY Acid proteases 106 451 IPR021109 -
Dere04g0836 452 Pfam Xylanase inhibitor N-terminal 113 275 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0836 Dere-ChrDere04 8594414 8595772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0836 97 452 Miscellaneous Gene Families AT1G77480 28.934 3.77e-21 93.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0836 04 8594414 8595772 Dere04g0836 04 8594414 8595772 ECH