Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0784 ATGGCCGCATATTCCAGAGACCGGGCACTCTCTCTCCTCGCCGCTGCCAACAACCATGGCGACTTAACCGTCAAAATTTCGTCTTTAAAACAAGCCAAAGATATTCTTTTGTCAATGGAGCCATCTTCTGCTGCTGAGCTTTTCTCCTACTTGGTCGAGCTTCAGTCCTCACCCGAAACCCTGGTTCGAAAATTGCTCATCGAGGTAATTGAAGAGATAGGTTTAAAAGCAGTAGAGCATTCTTCTACACTAATGTCTGTGTTGTTAACATTTTTACGAGATGGTGACACAATGATTATAAAGCAATCTATTGTTACTGGCACAAATATCTTCTGCAGTGTTTTGGCAGAGATGACATTGCAGTATCAACAATATGGTGAAGTTGAGAGGCGGCTGGAGGAGATTTGGATGTGGATGCTTAAGTTCAAGGATGCCGTATTTGGTATTGCTCTGGAGCCAGGTTTAGTTGGAACGAAGTTGCTAGCACTGAAATTCTTGGAAACACTAGTGTTACTTTTTTCATCCGACATCAGTTATGCTGAGAAGTCAGCTTCAGAAGGAGGTAGAAGAGTATTTAATATCTCTTGGTTGGAGGGTAGTCACCCTGTTCTTGATCCAGTGATGCTCATGTCAGAAGCAAATAGGACTGTTGGCATTCTATTAAATTTATTGCAATTGGCTGGTAGTCTTCCTGGTTGCTTGACTATTACTGTTGTCAATTGTCTTGCAGCAATTGCGAGGAAAAGGCCGCAGCATTGCAATATTGTTCTTCCAGCATTGCTTGATTTTGATCCAAATTTTCAAATAGTAAAAGGATCTCATGCTGCCAGTATCCAATACTCCTTAAGAACAGCATTTTTGGGATTTCTAAGGTGCACTTATGTACCAATATTAGAGTCAAGAGAAAGATTGGTAAAGAGCCTGCGAGCTATGAATGCAGGGGATACTGCTGAGCAAGTCATTCGGCAAGTTGACAAATTGATTAAGAATGGTGATCGATTTATCCATGATGCTCGAGTTAGCAAGGATGATCATTTATCGACTCAAACACCTGTTTCTGGGGAATTATCTAGAAAACGATCAACACCTCTAGATAATGAACAATTGGCCAATGGTTATGAGGCCATCTCCAAGCGATTGCGTTCTGGTTCTGACCCACGCTCTCCTTTACCTGCTCAAATAATTGATTCTGGGCAGGATGTTAACTCTTTTAGTGGATTACCCTCTAATGTTCCTGTGCTGGATAGCGAACTAAGTGCTGTGGAGCAAATGATTGCCATGATTGGTGCTTTGCTTGCTGAAGGAGAAAGGGGTGCTGAATCTCTAGAAATCCTTATTTCAAAGATCCATCCTGATCTGTTAGCTGATATTGTCATAACTAATATGAAGCACTTGCCTAAGACACCCCCATCATTGACAAGGCCTGGGGATTCACCAGTAACACAACAAGTAGATATCCGAGGCAGTCAATTGCAGGTTGCATCAACGTCTGCTCCATTTAATTCTGTGCAGTCCTCTGCTGTCCCTGCCCAAGCTCCATTTCCTTCAGCTACAGCCACTGCCACTGCTGCATCACTATCTGACATCTCTAACATCAATAATCTGCCTGCTGATTCTAAACGTGATCCTCGCAGGGATCCCCGTCGCCTGGATCCCAGGCATGTAGCAGTAACTGCTGTGGGGGCAGCTGTATCAGTTTTGGATGACACTGGTTCCGTGAAAAGCAAGTTTGATGAATCTTTGTCTTTGACTAAGCCTGTTTCACTTCCTGTCGTGACCACTAATGACAATACTCCTGCACCTCTTACAGCCAATATCAAAAGTGAAGATATGATCTCTGAAGATAAGCCAGTTACTGGACCTGAACAACCAATTCCCAAAACAGAGGTTCAAGAGATGCCTGGAGACATTGCCCAGAATCCAGAAGCAACTGCTATTTTGGATCGCTCACTCTCTGCTGCTGATATAATAGATGAGGATCTGAGTACACTGAAGTTATCAGATACTGAGGCAAAAGGGACAGATTCGTCATCTTTACTGGAATTTGATCAGTTTTCTCCAGATGCTACAACTGCATCTATGTCAGAAGATAGCTGTCTAGAATTACCACAGCTTCCACCGTATGTTGAACTATCCAATGATCAAGAAAGTAGCATCAAGCTCATGGCAATTAAGCATATTATCAAGTCATACAAGCATTTGCATGGGACAGATTGTCAGCAGTTTTGCATGCCATTACTTGCTCGAATGGTAGCACAGATTGATGACGATAAAGAGTTTATTCTGATGCTTCAAAAACACATCCTGGATGACCAGTGGCGAAAGGGGCATGAACTTGTGTTGCATGTTTTGTACCATCTGCACTCCTGTGCCTTGTTGGGTTCAATTCCAAACTCTTCATCTACTGCTGTGTTGTATGAAAATTTCCTCTTGGGAGTGGCCAAATCTCTATTGGAGTTTTTCCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTAGGTGAAGTCCCACTTTTGCCGGAATCTGCCTTGAAGATTTTGAACGATCTCTGCTATTCTAGTGTTAGTGATCATCATGGTAAAATTGTCCGTGACATTGAGCGTGTAACTCAGGGCCTTGGTGCCATTTGGAGTTTAATATTGGGACGTCCACAATATCGGCAGGCCTGCTTAGATATAGCACTGAGGTGTGCTGTTCATCAACAGGATGAGATTCGAGCAAAAGCTATTCGGCTGGTGGCAAACAAACTCTATCAGCTTAGCTATATATCAGAAGATGTTGAACAATTTGCAAAACAAATGCTTCTGTCTGCTGTAGATCAAAAGGTCCTAGATACAGGTCTTTCTCAATCTGGACTCACTGAGCCAGGAGCTGAAGCAGAGGTTGAAAGTCAGGAAACACAAGGTCCATTGCAAGTTTCAGAATCCACAACTTCTGAAAATGACCCCGCTAGAATTGCTAAACCAACTGTTCTAAGTGTTGCATCTGTTTCATTCTCTGATGCTCAACGTCTCATATCTTTGTTTTTCGCTTTATGCACAAAGAAACCCAGTCTTATTCAGATTATATTTGATGTCTATGGGCGAGCCCCAAAAACTGTTAAGCAGGCCATTCATCGTCACATTCCTATTCTAGTCAGGGCATTAGGACAATCGTATTCAAAAATACTCCATATTATATCTGATCCACCACAAGGGAGCGAAAATCTTCTGTCACTGGTGCTGCAAATATTGACTCAAGAGACGACACCATGTTCTGATCTGATAGCTACTGTTAAGCATTTATATGAAACTAAATTAAGGGATGTTTCAATTTTTGTTCCCTTGCTTCCATCGCTTTCCAAAAATGAGGTTTTACCAATATTCCCTCAGCTTGTTGACCTTCCATTGGAAAAGTTCCAAATGGCACTTGCTCATGTACTACAGGGTTCAGCTCATACAGGTCCAGCTTTGACACCTGTAGAAGTGTTGGTTGCAATCCATGGCATTGTTCCTGAGAAAGATGGCATTGCACTTAAGAAGATAACTGATGCTTGCTCAGCTTGTTTCGAGCAACGTACAGTGTTCACACAGCAGGTTCTGGCAAAGGCATTAAACCAGATGGTTGATCAAACTCCTTTGCCTCTACTTTTCATGAGAACAGTCATTCAGGCCGTTGATGCTTTTCCTGTACTGGTTGATTTTGTTATGGAGATACTATCGAAGCTTGTGAGTAAACAGGTGTGGCGTATGCCCAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACTCAGCCACGTTCTTTTCATGTATTATTGCAGTTGCCACCTCCACAACTGGAAAGTGCTCTAAACAAACATGCTACTCTCAGAGGTCCCCTTGCTTCTTACGCCAATCAACCCACTGTAAAATCTTCACTACCTAGATCAACATTAGTCGTTCTTGGTCTCGCAAATGAAACAAATGTGCAGCAACATTTGTCAACGACGTTGCACCCTTCTGACACGAGTTCTGTCCATGGAGCAACTCTGACATGA 4017 0.4254 MAAYSRDRALSLLAAANNHGDLTVKISSLKQAKDILLSMEPSSAAELFSYLVELQSSPETLVRKLLIEVIEEIGLKAVEHSSTLMSVLLTFLRDGDTMIIKQSIVTGTNIFCSVLAEMTLQYQQYGEVERRLEEIWMWMLKFKDAVFGIALEPGLVGTKLLALKFLETLVLLFSSDISYAEKSASEGGRRVFNISWLEGSHPVLDPVMLMSEANRTVGILLNLLQLAGSLPGCLTITVVNCLAAIARKRPQHCNIVLPALLDFDPNFQIVKGSHAASIQYSLRTAFLGFLRCTYVPILESRERLVKSLRAMNAGDTAEQVIRQVDKLIKNGDRFIHDARVSKDDHLSTQTPVSGELSRKRSTPLDNEQLANGYEAISKRLRSGSDPRSPLPAQIIDSGQDVNSFSGLPSNVPVLDSELSAVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPSLTRPGDSPVTQQVDIRGSQLQVASTSAPFNSVQSSAVPAQAPFPSATATATAASLSDISNINNLPADSKRDPRRDPRRLDPRHVAVTAVGAAVSVLDDTGSVKSKFDESLSLTKPVSLPVVTTNDNTPAPLTANIKSEDMISEDKPVTGPEQPIPKTEVQEMPGDIAQNPEATAILDRSLSAADIIDEDLSTLKLSDTEAKGTDSSSLLEFDQFSPDATTASMSEDSCLELPQLPPYVELSNDQESSIKLMAIKHIIKSYKHLHGTDCQQFCMPLLARMVAQIDDDKEFILMLQKHILDDQWRKGHELVLHVLYHLHSCALLGSIPNSSSTAVLYENFLLGVAKSLLEFFPASDKSFSRLLGEVPLLPESALKILNDLCYSSVSDHHGKIVRDIERVTQGLGAIWSLILGRPQYRQACLDIALRCAVHQQDEIRAKAIRLVANKLYQLSYISEDVEQFAKQMLLSAVDQKVLDTGLSQSGLTEPGAEAEVESQETQGPLQVSESTTSENDPARIAKPTVLSVASVSFSDAQRLISLFFALCTKKPSLIQIIFDVYGRAPKTVKQAIHRHIPILVRALGQSYSKILHIISDPPQGSENLLSLVLQILTQETTPCSDLIATVKHLYETKLRDVSIFVPLLPSLSKNEVLPIFPQLVDLPLEKFQMALAHVLQGSAHTGPALTPVEVLVAIHGIVPEKDGIALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPVLVDFVMEILSKLVSKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQLESALNKHATLRGPLASYANQPTVKSSLPRSTLVVLGLANETNVQQHLSTTLHPSDTSSVHGATLT 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0784 1338 Pfam Symplekin tight junction protein C terminal 1101 1279 IPR022075 -
Dere04g0784 1338 MobiDBLite consensus disorder prediction 538 552 - -
Dere04g0784 1338 Gene3D - 1 334 IPR011989 -
Dere04g0784 1338 MobiDBLite consensus disorder prediction 345 361 - -
Dere04g0784 1338 MobiDBLite consensus disorder prediction 949 982 - -
Dere04g0784 1338 Pfam Symplekin/PTA1 N-terminal 96 318 IPR032460 -
Dere04g0784 1338 MobiDBLite consensus disorder prediction 964 982 - -
Dere04g0784 1338 MobiDBLite consensus disorder prediction 339 361 - -
Dere04g0784 1338 SUPERFAMILY ARM repeat 18 1131 IPR016024 -
Dere04g0784 1338 MobiDBLite consensus disorder prediction 531 552 - -
Dere04g0784 1338 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0784 Dere-ChrDere04 7959591 7981543 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0784 04 7959591 7981543 Dere04g0784 04 7959591 7981543 ECH