Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0782 ATGGGGTCGTTCCGACGGACTTTGTCGCCGGCGTACCACGATCGGCAGTACCAAAACGGTGTTGGCTCCTTTTCAGCATCCTCTCCTCATCACAAGTTTGCTCCCAATGCCAAGTACACTTCGCCATTGCCGGCGTTGGTTGCATACGTCGTCAGATTGCGGAGGTTTCTTGCCGGGTTCTTTGTGCGGCGATATGCTCGGAAAGGGCAATGGAGAAGAGCGCTGTGTAGGTGTTTGATCTTTTTCTTCTTAGGTTTCTTGTGGGGTATGTTTCCTTTCGGTCACATTGGGGACGACATTCGCCGTCCGAATATCTCGTTCGAGATCAAAGCGCCTCACGTGAATGCACAATTAGTTCCTGAGGATCGTGTTCTGAAGCGTGACGACGGTTTTGTGATTAGTCCACTGATTTTGAGTGCCGATAAGCAGAGTGCAATCCATGAGAGGCTCGATATTTTGCCAAGGAAGCAGTTGATTGTGGTGACTCCCACATATAATCGGGCGTATCAGTCCTATTTTTTGAACAGGTTGGGTCACGTGCTCAGGCTCGTACCTCCGCCGGTTCTGTGGATTGTGGTGGAAATGAATTCAGCTTCTATGGAGACTGCTGAAATACTGAGGAAAACTGGCGTGATGTATAGGCACTTGGTCTGCACAAAGAACTCCACAAATGTGAAGGACAGAGGAGTTCATCAAAGGAATACGGCATTGGAGCACATTGAGCATCATAGACTTGATGGGATCGTCTACTTCGCAGACGATGATAATATATATTCGCTGGAGTTGTTTGAGACCTTGAGAGACATAAGCCGCTTCGGAACTTGGCCTGTTGCCATGCTTGCTCAAAGCAAAAACAAGGCCATCTTGGAGGGTCCTGTATGCAATGCAAGTCAAGTGATTGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGGTTTCATGTTGATATGTCTGGATTTGCTTTTAATAGCACAATCTTGTGGGATCCCAAAAGATGGCAGCGCCCGACTTCAAATCCCATTCGACAGTTAGACACAGTGAAGGAGGGTTTTCAAGAGACTACCTTTATAGAACAATTGGTGGAAGATGAGAGTCAAATGGAAGGTTTACCTCCTGGTTGTTCCATGATAATGAATTGGCATCTCCATTTAGAAGCTTATAACATAGTTTATCCCAAGGGTTGGCTGCTCCAGAAAAACCTAGATGCTGTCATCCCTGTCAAATAA 1230 0.4642 MGSFRRTLSPAYHDRQYQNGVGSFSASSPHHKFAPNAKYTSPLPALVAYVVRLRRFLAGFFVRRYARKGQWRRALCRCLIFFFLGFLWGMFPFGHIGDDIRRPNISFEIKAPHVNAQLVPEDRVLKRDDGFVISPLILSADKQSAIHERLDILPRKQLIVVTPTYNRAYQSYFLNRLGHVLRLVPPPVLWIVVEMNSASMETAEILRKTGVMYRHLVCTKNSTNVKDRGVHQRNTALEHIEHHRLDGIVYFADDDNIYSLELFETLRDISRFGTWPVAMLAQSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWQRPTSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGLPPGCSMIMNWHLHLEAYNIVYPKGWLLQKNLDAVIPVK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0782 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 157 402 IPR029044 -
Dere04g0782 409 CDD GlcAT-I 158 387 IPR005027 GO:0015018|GO:0016020
Dere04g0782 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 157 402 IPR029044 -
Dere04g0782 409 Pfam Glycosyltransferase family 43 177 386 IPR005027 GO:0015018|GO:0016020
Dere04g0782 409 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 70 403 IPR005027 GO:0015018|GO:0016020
Dere04g0782 409 FunFam Glycosyltransferases 157 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0782 Dere-ChrDere04 7955008 7957823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0782 1 409 Glycosyltransferase AT1G27600 61.743 0.0 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0782 04 7955008 7957823 Dere04g0782 04 7955008 7957823 ECH