Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0757 ATGGAAGACGATAGAATACTCGAGAGGGAGAGGCATCAGATCGAGCAGATTCGTCAGCTCGATCTAGAAGAATTGCAGGTTGAGGAAGTTGATGACCTCCAAGATTCATCCGATGAGGACGTCAATGGCCGTGGCTATGTCGGGGCTGTTTCATCTGCTGAATTCACTTTTGATACCTGTCTAACTTCTTTACATACATATCTCGGTGAGGTTGAAGACACGCACCACAGGACAGCTTTCTTGGATGGCGGTGCTCTTTTAAGCCTCCCACTTTTCTATCTAGAAGGAGTTGTACTCTTTCCTGGGGCTACTCTTCCCCTGAGAGTTATTCAACCCAATTTTGTTGCTGCTGTTGAGAGAGCACTGAGTCAAGTTGATGTTCCTTACACCATTGGTGTGATTAGAGTTCACAGGGATAACAGAAGCCGTAGGACGAAATTGGCTAGCATAGGAACAACTGCAGAGATTCGACAATACAGGCGGCTAGAGGATGGTTCACTGAATGTGGTTACCCGTGGACAACAGCGATTTCGACTAAAACGCTGTTGGTTTGATGTGGACAGCATGCCTTGTGGAGAGATCCAAATTATTGAGGAAGATCTACCACTAAGAACTCCCAAGGATGCTTTTGGAAAATTAGCACCATTAAGTAATCTTCCTCATAACCGTGCCATCTCCTCACGTTTGCCTTCAAATCATTCTTGCACTAAAGTGCATGGATCCAAATATGGGGACAATGATTCAGAAGACAGCTTTGAAAGCTTTGAGGATGAGCTTTCACTGATGGAAAGGAGAATCCACCAATCAGTCATTGGTCATGAGCATGATATTATGGATGAATCATCTAGCAGCGATTATGAAGAATGCATGTATGAGTCAGATCAGGAAATTAGATGTAACCTAAATGACTCTGACTTCACGAGTTCATTGCTCTCTAAGCATGGAAAACAAGCTGTAAATATAGACTTGATACGTGGGAGCTGTTCTACTTCAGGTAAGCAATCCTGCAAAAGGGAAGAGTGTAAAAGTGCAGATGCCAACTTCTCTCATGGAATTTCAAGAGCATTCTGGCCCCATTGGGTATATCGAATGTTTGACTCCTATTGCCTTGCACAGAGGGCAGCAGATTTGTGGAGGAACGTAGTTGGGGCGCCAAGCATGGATATTCTTGTGAAGAAGCCTGATGTTTTATCATTTCATATTGCCAGTAAAATACCTGTGTCTGAATCTACAAGGCAGGAGCTTTTGGAGATTGATGGTATCTCATATAGATTGCGTAGGGAGATTGAATTATTAGAGAGTGTTAATCTTGTTCGATGTAAGAACTGCCAGACTATCATTGCAAGGCGAAGTGATATGTTGGTGATGTCTAGTGAGGGTCCTCTTGGTGCTTTCGTGAATCCAGGTGGTTATGTGCATGAGATTATGACTCTGTGCAAAGCAAGTGGCTTAGCGCTTATTGGGCAAGCTGCCACAGAGTACAGTTGGTTTCCTGGATATGCATGGACAATCGCCAACTGTGGTACATGTGAAACCCAAATGGGGTGGCTTTTTACAGCAACAAACAGAAAACTGAAACCTAGATCATTTTGGGGGATACGCAGTTGTAAAGTTGCAGAAGAGATGCGCTAA 1632 0.4381 MEDDRILERERHQIEQIRQLDLEELQVEEVDDLQDSSDEDVNGRGYVGAVSSAEFTFDTCLTSLHTYLGEVEDTHHRTAFLDGGALLSLPLFYLEGVVLFPGATLPLRVIQPNFVAAVERALSQVDVPYTIGVIRVHRDNRSRRTKLASIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLKRCWFDVDSMPCGEIQIIEEDLPLRTPKDAFGKLAPLSNLPHNRAISSRLPSNHSCTKVHGSKYGDNDSEDSFESFEDELSLMERRIHQSVIGHEHDIMDESSSSDYEECMYESDQEIRCNLNDSDFTSSLLSKHGKQAVNIDLIRGSCSTSGKQSCKREECKSADANFSHGISRAFWPHWVYRMFDSYCLAQRAADLWRNVVGAPSMDILVKKPDVLSFHIASKIPVSESTRQELLEIDGISYRLRREIELLESVNLVRCKNCQTIIARRSDMLVMSSEGPLGAFVNPGGYVHEIMTLCKASGLALIGQAATEYSWFPGYAWTIANCGTCETQMGWLFTATNRKLKPRSFWGIRSCKVAEEMR 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0757 543 FunFam ATP-dependent protease La domain-containing protein 69 197 - -
Dere04g0757 543 PANTHER CEREBLON 39 536 - -
Dere04g0757 543 Pfam ATP-dependent protease La (LON) substrate-binding domain 89 433 IPR003111 -
Dere04g0757 543 SUPERFAMILY PUA domain-like 88 433 IPR015947 -
Dere04g0757 543 ProSiteProfiles Lon N-terminal domain profile. 89 434 IPR003111 -
Dere04g0757 543 FunFam Lon protease homolog 366 430 - -
Dere04g0757 543 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 438 528 IPR004910 -
Dere04g0757 543 Gene3D - 366 430 - -
Dere04g0757 543 Gene3D Peptide methionine sulfoxide reductase. 431 543 - -
Dere04g0757 543 FunFam Blast:Protein cereblon homolog 431 543 - -
Dere04g0757 543 Gene3D - 81 197 IPR046336 -
Dere04g0757 543 ProSiteProfiles CULT domain profile. 435 542 IPR034750 -
Dere04g0757 543 CDD CRBN_C_like 438 534 IPR034750 -
Dere04g0757 543 MobiDBLite consensus disorder prediction 228 250 - -
Dere04g0757 543 SMART lon_5 88 434 IPR003111 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0757 04 7601652 7608383 Dere04g0757 04 7601652 7608383 ECH