Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0739 ATGGATTCTGTACCCTCCAATTCTTTCCCTCACCCTCGCTTCAGACACACTCAACCTATCTCGGATCGGATACTCCGAGCCCTCCGCCATCGCCTCCGCCTTCTCCACCGTTCCGATTCCTCCTTCTTCATACTGGGTGCCACCGGAAATGTCTACACTGTCACTCTCTCTTCCCTTCCCTCCTGCACCTGCCCTGACCGTACAACCCCTTGCAAGCACATTCTTTTCGTTTTCATTCGAGTTCTGGGCGTCTCCGTCGACGATGTCTGCCTGCGCCGGAGAACCCTTCGCCCCTGCCAGCTCCGCCGCCTTCTCGGCTTGCCCACGTCGCCGGAGACCGTCGCTGGGGCCGCGCTCCGCGAGAGGTTTCACCAGCTCTTCTTTAGTGGAAGGCAGGGAGGGTGCACGAGACCCACTATAGAGGTAGAGGATGGGACGTCGTGTCCCATTTGTCTGGACGATATGGGGAAGGATGAGAAGGTTGTGGCTTGTGGGACGTGTCGGAATCCGATTCACGAAGAGTGCTTGGTGAAGTGGAAGAGATGCAGGGGACGGAGGCTAGCTAGTTGTGTGATTTGTAGAGCCAGATGGAGGGATAGGAATGATCAAGATAAGTATCTGAATCTGTCTGCCTATGTTAGTCAGGACAATATGGCCGAACCTGGTGGGGGTCCCTGCACTGGCTGA 687 0.5633 MDSVPSNSFPHPRFRHTQPISDRILRALRHRLRLLHRSDSSFFILGATGNVYTVTLSSLPSCTCPDRTTPCKHILFVFIRVLGVSVDDVCLRRRTLRPCQLRRLLGLPTSPETVAGAALRERFHQLFFSGRQGGCTRPTIEVEDGTSCPICLDDMGKDEKVVACGTCRNPIHEECLVKWKRCRGRRLASCVICRARWRDRNDQDKYLNLSAYVSQDNMAEPGGGPCTG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0739 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 211 IPR013083 -
Dere04g0739 228 ProSiteProfiles Zinc finger RING-type profile. 148 194 IPR001841 -
Dere04g0739 228 SUPERFAMILY RING/U-box 140 200 - -
Dere04g0739 228 ProSiteProfiles Zinc finger SWIM-type profile. 52 82 IPR007527 GO:0008270
Dere04g0739 228 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 8 207 IPR039903 GO:0061630
Dere04g0739 228 Pfam Ring finger domain 147 194 IPR001841 -
Dere04g0739 228 Pfam SWIM zinc finger 52 80 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0739 Dere-ChrDere04 7464414 7465100 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0739 04 7464414 7465100 Dere04g0739 04 7464414 7465100 ECH