Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0734 ATGGCTTTCACAAGCTCGCTTGCTATCAGAAACTCCATATCGCTGCCAACAATGGTGGTTTCTGATAGCAGCTACAAGGATGGGTTTTCATTTGGCAATAATAGTAAGGGCTTCTTCAAAACCCAACGCACTTTTCAAGACTTGACTGTCACTCATGTTGCCAGTCCGACGCCTGCAATTGCTCCGCCACCACCAACGCCGCCGGAGAGATCGGAAACCACCGGTGGCCCCCACCATCCTGCATGGACTAGTATATCACAAGAGAGATGGGAAGGAGAGCTCCATGTTCAAGGACGAATACCATTATGGCTGAAAGGAACGTACCTAAGGAATGGTCCAGGGTTGTGGCACATAGGGGACTACAACTTCAGGCACCTGTTCGACGGCTACGCCACTCTGGTGAGACTACACTTTGAGAACGGCCGGTTAGTCGCCGGCCACCGCCAAGTGGAATCCCAAGCTTATCAAGCCGCTAAAAAGAACCAAAAACTATGTTACCGTGAATTCTCCGAAGCCCCAAAGCCTACTAATTTCCTAGCCTATGTGGGCGAGCTTGCTAGTTTGTTCTCCGGTGAATCGCTAACTGACAACGCCAACACCGGCGTCGTAAAACTTGGTGACGGGCGGGTGGTTTGCCTGACGGAGACTCAGAAGGGTTCCATTGTGATAGACCCGATTACATTGGAAACGTTGGGGAAATTTGAGTATAGTGACACATTAGGGGGTTTGATACACTCAGCACACCCCATTGTGACTGATACAGAATTTTTGACGTTATTACCAGACTTGATAAAGCCTGGCTATTTAGTGGTGAGGATGGAAGCCGGGTCGAATGAACGGAAAGTGATCGGACGGGTTAACTGTCGGGGCAGGCCGGCACCGGGATGGGTCCACTCGTTTCCGGTGACTGAACATTACATCATTGTGCCTGAAATGCCGTTGAGATACTGTGCCCAAAATTTGCTGAGAGCTGAACCCACACCATTGTACAAGTTTGAGTGGTGCCCTCAATTCAAAGGTTTTGCTCATGTCATGTGCAGGACCAGTGGAAAGATTGTGGCAAGTGTGGAAGTGCCTTTGTACATTACGTTCCATTTCATAAATGCATATGAAGAGGAAGATGAAGATGGAAGAGTGACGGCCATTGTTGCCGACTGTTGTGAGCACAATGCAGATGTTACCATTCTTGATAGGCTCAGGCTCCAGAACCTCCGTTCCTTCAATGGCGAGGATGTACTACCTGATGCTAGGGTTGGAAGGTTCAGAATACCTCTGGATGGGAGTGAATATGGCACATTAGAGGCAGCATTAGACCCAGATGAACATGGGAGAGGCATGGATATGTGCAGCATCAACCCTAATTATTTGGGCAAAAAATACAGATATGCCTACGCATGTGGAGCGCAGCGCCCATGTAACTTCCCCAACACCCTCACCAAGCTTGATTTGGTGGAGAAAAGGGCAAAGAATTGGCATGAGGAAGGTGCTGTTCCCTCAGAACCTTTTTTTGTGGCTCGACCAGGAGCAACAGAAGAAGATGATGGCGTGGTTATCTCCATAGTGAGTAAGAAAAATGGAGAAGGATATGCGTTACTGTTAGATGGTTCCACCTTTGAAGAGGTTGCCAGAGCCAAGTTCCCTTATGGACTACCATACGGATTGCATGGATGCTGGGTTCCGAAACAGTGA 1689 0.4873 MAFTSSLAIRNSISLPTMVVSDSSYKDGFSFGNNSKGFFKTQRTFQDLTVTHVASPTPAIAPPPPTPPERSETTGGPHHPAWTSISQERWEGELHVQGRIPLWLKGTYLRNGPGLWHIGDYNFRHLFDGYATLVRLHFENGRLVAGHRQVESQAYQAAKKNQKLCYREFSEAPKPTNFLAYVGELASLFSGESLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPITLETLGKFEYSDTLGGLIHSAHPIVTDTEFLTLLPDLIKPGYLVVRMEAGSNERKVIGRVNCRGRPAPGWVHSFPVTEHYIIVPEMPLRYCAQNLLRAEPTPLYKFEWCPQFKGFAHVMCRTSGKIVASVEVPLYITFHFINAYEEEDEDGRVTAIVADCCEHNADVTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSEYGTLEAALDPDEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDLVEKRAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSKKNGEGYALLLDGSTFEEVARAKFPYGLPYGLHGCWVPKQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0734 562 MobiDBLite consensus disorder prediction 55 81 - -
Dere04g0734 562 PANTHER BETA-CAROTENE DIOXYGENASE 86 560 IPR004294 GO:0016702
Dere04g0734 562 MobiDBLite consensus disorder prediction 57 71 - -
Dere04g0734 562 Pfam Retinal pigment epithelial membrane protein 86 560 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0734 Dere-ChrDere04 7410661 7413847 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0734 04 7410661 7413847 Dere04g0734 04 7410661 7413847 ECH