Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0727 ATGGCAGCTTCATATCCGGCATATGTACTGAAATGCTCCGTTCAGAAAAGACCAGGCTCCGTTACAGACAATTTTCATCAGTCCAGCATTCCACTATCCTCAACTTTCAAGCCGATCCTGAGATCTCTTCCTCAAGTCCCCTTGCAAATTGGCGCCCCCAAAACCTTCACCAACATAACAGCTAAAATACTGGACGCTTTTGTTGATTCAGTCTTTGAGTTCATTGACCAGCCTCTGCTTCCATCTCAGAGTAACTTTGCTCCAGTGGAGGAGTTGGGGGAAGCCATGCTTATCTCCACCATAGAAGGAGAAATCCCACATGATTTTCCAGATGGTGTCTACATTAGAAATGGTCCAAATCCACTATTTGGAGGACTGAAAACAACCAAATCTATCTTTGGGAGATCAAGTCATATTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTTAAAAAAACAAGTTATGGGAACTGGACGGTCATCTACAATAACAGATATGTCGAAACCGAAACTTACAAGCTAGAGAAACAAAGAAACAAGCCATCATTTCTCCCGGCCATAGAAGGCGATTCACCTGCCATTTTGTCTGCTTATCTCCTAAACTGGTTGAGATTTGGCAAAGTGAACAAATACCTTAGCAACACCAACGTGTTCGAGCATTCTGGGAAGTTCTACTCAATTGCTGAAAATCACATCCCGCAAGAGATTGACATCTTCACCCTCAAAACCTTGAAAAATTGGGATGTCAATGGTGCCTGGAATCGACCTTTTATCAGCCACCCAAAGAAAGCTCCAGATACAGGGGAGCTAGTTACATTAGGAGTGGCTGCAACTAAACCTTTTGTTACACTCGGAATCATTTCAAATGATGGAAAGAAATTGATTCATAAAGCGGATATCAAATTAAATAGGTGCAGCCTTTGCCATGACATAGGCGTTACACAAAGGTACAATGTGATCATGGATTTTCCGCTAACCTTGGATCTGAACAGACTTGTTAGAGGAGGCCCATTGATAAAGTATAACAAGGAGGGATACGCAAGAATTGGAGTAATGCCACGCTATGGTGATGCCAACTCAATACGGTGGTTTGAGGTGGAACCTAATTGCACATTTCACATAATCAATTCTTTTGAGGATGGCCACGAGGTTGTAGTGTGGGGATGCAGAGCTCTTGATTCTCTAGTTCCTGGACCAGATCCTACTTTGAATAAATTTGAGTCATTTTCTCGTTGTCATGAGTGGAGATTGAATCTGCAATCTGGGGAAGTTAAAGAGAAAGAGCTCAGTGGAGCAAAAGTACATTATATGGATTTTCCGATGATCAATGCAAATTTCGCAGGTATTAAGAACAGATATGGATACACACAAGTAGTTGATCCTGTTGCAAGCTCCGCTATAGGCGTGCCTAAATGTGGAGGTCTAGCCAAGCTCTACTTTGAAAAACCATGCATAGAGGGGTCTGCGAGAGACAAACAAGATGAAGAGCCTATAAGGGCGGAATACCATATGTTTGAGAAGAACGTATTTTGCACAGGAGCTGCCTTCGTCCCTAAAAGTGATGGGGTTGAAGAAGATGACGGTTGGATCATCACCTTTGTTCACAACGAAGATACTGGCATATCTCAAGTTCATATAATTGACACAAAAAAGTTTTCTGGCGAGACAGTTGCCAAGATTACACTGCCTCAACGAGTTCCATATGGTTTCCACGGAGCTTTCATGCCAATCTCATTGGAGACATAA 1752 0.4247 MAASYPAYVLKCSVQKRPGSVTDNFHQSSIPLSSTFKPILRSLPQVPLQIGAPKTFTNITAKILDAFVDSVFEFIDQPLLPSQSNFAPVEELGEAMLISTIEGEIPHDFPDGVYIRNGPNPLFGGLKTTKSIFGRSSHIWVEGEGMLHALYFKKTSYGNWTVIYNNRYVETETYKLEKQRNKPSFLPAIEGDSPAILSAYLLNWLRFGKVNKYLSNTNVFEHSGKFYSIAENHIPQEIDIFTLKTLKNWDVNGAWNRPFISHPKKAPDTGELVTLGVAATKPFVTLGIISNDGKKLIHKADIKLNRCSLCHDIGVTQRYNVIMDFPLTLDLNRLVRGGPLIKYNKEGYARIGVMPRYGDANSIRWFEVEPNCTFHIINSFEDGHEVVVWGCRALDSLVPGPDPTLNKFESFSRCHEWRLNLQSGEVKEKELSGAKVHYMDFPMINANFAGIKNRYGYTQVVDPVASSAIGVPKCGGLAKLYFEKPCIEGSARDKQDEEPIRAEYHMFEKNVFCTGAAFVPKSDGVEEDDGWIITFVHNEDTGISQVHIIDTKKFSGETVAKITLPQRVPYGFHGAFMPISLET 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0727 583 PANTHER BETA-CAROTENE DIOXYGENASE 95 577 IPR004294 GO:0016702
Dere04g0727 583 Pfam Retinal pigment epithelial membrane protein 87 578 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0727 Dere-ChrDere04 7340474 7343905 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0727 04 7340474 7343905 Dere04g0727 04 7340474 7343905 ECH