Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0713 ATGGCTACCCACGACTACGATGATGCGCGTGCCGGATACGATGACCACCGCCAGCCACCACCACAGTCTCAAGACCTGGGCTATGATCCGAATTTCGTACCCGATTCTGTGAAGTCATTCGTTGTCCACCTCTACCGCCACATACGAGAGAAGAATGTGTACGAAATTCACCAGATGTACGAGAACTCGTTCCAAACCCTCTCGGAGCGTCTCTTCAAGGACACTCCTTGGCCTTCTGTGGACGCTGTCGCTAACTACGTCGACAATGATCATGTCTTCTGCCTCCTGTACCGTGAGATGTGGTTTCGCCACCTCTATGCTAGGCTTACGCCAACGCTTAAGCAAAGGATAGATTCCTGGGACAATTATTGTAGCCTTTTTCAGGTTGTTTTGCATGGGGTTGTCAATATGCAGCTGCCCAACCAGTGGTTGTGGGATATGGTGGATGAGTTTGTTTACCAGTTTCAGAGCTTCTGTCAATATAGAGCGAAGATGAAGAATAAAACTGAGCAGGAAATTGCGCTTTTGAGGCAGTATGATCAGGCTTGGAACGTGTATGGCGTCCTTAACTTCTTGCAAGCCCTTGTTGAGAAGTCCATGATTATTCAGATCCTTGAGCAAGAAAAGGAAGGCCTGGAACAATTTACTGCTACTGATGGGTATGATTACAACGGAGGGAGTAATGTCTTAAAGGTTTTGGGGTATTTCAGCATGGTCGGATTACTTCGAGTTCATTGTCTTTTAGGTGATTATCATACCGGTCTCAAGTGCTTGCTTCCAATTGATATTAGTCAACAAGGCGTTTACACCAGTGTTATTGGAAGCCACATTACCACCATATATCATTATGGTTTTGCCAATCTTATGTTGCGGAGATATGTGGAAGCAATCCGTGAATTTAACAAAATTCTTCTGTATATCTATAAGACAAAGCAGTATCATCAGAAATCTCCACAATATGAGCAGATACTGAAAAAGAATGAGCAAATGTATGCCTTGCTGGCAATTTGCCTTTCACTCTGCCCCCAAAGCAGGCTTGTTGATGAAACAGTGAACTCTCAGTTGCGTGAGAAGTATGGTGACAAAATGATTAGAATGCAAAGATATGATGATGAAGCTTTTGCTATCTACGATGAGCTCTTCTCATATGCATGTCCCAAATTCATTACCCCGTCAGCACCTAGTTTTGAGGAGCCTCTAGTAAATTACAACCAGGATGCCTATAGACTTCAGTTGAAACTGTTCCTTTATGAAGTGAAGCAGCAACAATTGTTATCAGGTGTCCGGACCTTCTTGAAAGTCTATTCAACAATCTCTCTCGCGAAACTTGCAAGTTACATGGAAGTGGATGAAGCCAATTTAAGGACTATCTTGATGACATACAAGCATAAGACTCATGCTGTTGATAGTGATGGAAAAGTTATATCCAATGCTGATGTGAATTTTTACATTGATGATGATATGATTCATGTTGTAGAGTCTAAGCCCCCCAAGCGATATGGGGATTACTTCTTGCGTCAGATAGTCAAGCTTGAGGGCGTGATCAATGAGATGGACGGTATAAAGCTGGAATAA 1575 0.4311 MATHDYDDARAGYDDHRQPPPQSQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYENSFQTLSERLFKDTPWPSVDAVANYVDNDHVFCLLYREMWFRHLYARLTPTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQYDQAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQSRLVDETVNSQLREKYGDKMIRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEANLRTILMTYKHKTHAVDSDGKVISNADVNFYIDDDMIHVVESKPPKRYGDYFLRQIVKLEGVINEMDGIKLE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0713 524 Pfam RNA polymerase I-associated factor PAF67 115 510 IPR019382 GO:0003743|GO:0005737|GO:0005852
Dere04g0713 524 MobiDBLite consensus disorder prediction 1 15 - -
Dere04g0713 524 MobiDBLite consensus disorder prediction 1 28 - -
Dere04g0713 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 29 522 IPR019382 GO:0003743|GO:0005737|GO:0005852
Dere04g0713 524 ProSiteProfiles PCI domain profile. 299 498 IPR000717 -
Dere04g0713 524 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 22 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0713 Dere-ChrDere04 7173940 7178568 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0713 04 7173940 7178568 Dere04g0713 04 7173940 7178568 ECH