Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0684 ATGTCCATGGATCCGAAGAAGTCTAACAAGATCAGAGAAATCGTTAGGCTTCAACAGATCCTTAGGAAATGGAGAAAGCAAGCCAACTCTTCCAAAACCAGTAGCAGTAACAGCAGCAGCAGCAGCAGCAGCAGTAAAAGCATCAAGTTTCTGAAAAGGACACTTTCTATATCTGAACGAGAAGGAGGATCAAGCAATATTGTTCCCAAAGGCTACCTGGCGGTATGTGTTGGAAAAGAGCTTAAGAGGTTCACTATACCTACTGAGTATTTGGGCCATCAGGCTTTTCACGTATTACTGAGAGAAGCAGAAGAAGAATTCGGGTTTCAACAGACTGGTGTTCTAAGAATTCCTTGTGAAATTCCCGTTTTTGAGAGTATCTTGAAGATGATGGAGGGAAAGAAGGACAATTTTTACACTCAGGAATGTAGACTTAACGTTGAAGAAATAGTAGGATACTGCTCATCAGAAAACCATCTTGCTTACCCTCACCATCCCCAGAGTCCAATGTGCATGTAG 519 0.422 MSMDPKKSNKIREIVRLQQILRKWRKQANSSKTSSSNSSSSSSSSKSIKFLKRTLSISEREGGSSNIVPKGYLAVCVGKELKRFTIPTEYLGHQAFHVLLREAEEEFGFQQTGVLRIPCEIPVFESILKMMEGKKDNFYTQECRLNVEEIVGYCSSENHLAYPHHPQSPMCM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0684 172 Pfam Auxin responsive protein 18 131 IPR003676 GO:0009733
Dere04g0684 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 128 IPR003676 GO:0009733
Dere04g0684 172 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0684 Dere-ChrDere04 6753503 6754021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0684 3 171 Calmodulin-binding Proteins AT4G31320 53.368 9.26e-62 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0684 04 6753503 6754021 Dere04g0684 04 6753503 6754021 ECH