Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0677 ATGGTGTTTTGGGTTTTTGGCTATGGTTCACTGGTGTGGAACCCAGGATTTGATTACGATGAGAAAGTTGTTGGATTCATAAAGGACTATAGACGTGTATTTGATTTAGCATGTATTGATCACAGGGGTACCCCTGAAAACCCTGCTAGAACTTGCACATTGGAGCCGAAAGAAGGGGCTATCTGCTGGGGCGCTGCTTATTGTGTTCGTGGAGGCCCTGAAAAGGAAAAACTAGCTATGCAGTATTTGGAGCGGAGAGAGTGCGAATATGATCAAAAGACTCATGTAGACTTTTACAAGGAAGGAGATTCACTGAGCCCTGCTTTAACTGGAGTAATAGTATTCACATCTACTGCTGACAAAGCAAACAAGTACTACCTGGGACCTGCCCCTTTGGAAGACATGGCGAGGCAAATAGCAACAGCTTGGGGTCCTTGTGGTAACAACAGAGACTATCTTTTCCTTTTAGAAAAGGCCATGTATGATATTGGCCATGAAGATGACTTGGTGATAGAGCTTGCAAATGAAGTGAGGAAGGTACTTGGAAATATGGAGTCGGTTGGACCAGCTCGGCTTGCGCACCCTTCTCATGTGCCTATCCCAGCCCTTTAA 612 0.4526 MVFWVFGYGSLVWNPGFDYDEKVVGFIKDYRRVFDLACIDHRGTPENPARTCTLEPKEGAICWGAAYCVRGGPEKEKLAMQYLERRECEYDQKTHVDFYKEGDSLSPALTGVIVFTSTADKANKYYLGPAPLEDMARQIATAWGPCGNNRDYLFLLEKAMYDIGHEDDLVIELANEVRKVLGNMESVGPARLAHPSHVPIPAL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0677 203 ProSitePatterns Glycosyl hydrolases family 5 signature. 169 178 IPR018087 GO:0004553|GO:0005975
Dere04g0677 203 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 187 IPR006840 GO:0006751|GO:0061928
Dere04g0677 203 Pfam ChaC-like protein 4 179 IPR006840 GO:0006751|GO:0061928
Dere04g0677 203 Gene3D - 2 168 - -
Dere04g0677 203 FunFam Gamma-glutamylcyclotransferase 2 185 - -
Dere04g0677 203 CDD GGCT_like 5 110 IPR013024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0677 Dere-ChrDere04 6691030 6692570 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0677 04 6691030 6692570 Dere04g0677 04 6691030 6692570 ECH