Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0635 ATGCATTGTTCGTATCTGGGGGAAGGTCTGGGCGAGTTCTGGGCGTGGATAACTCAGTCAATTGACCAGGACTGTGACCCCTTTGTCACATTTGGACCTTCTCCCTACAACATCATCCCTGTGAAGTTCTCAGAGCACCAAGAGAGAACACCCAGGGGATTTGAGATAATGCTAAGGAAGGGGACCAGGTCACTCCAGAAGGATCAACATCCCATGGGTCATCTGACTATCTCTGATACTAATTGGGACTACTATTCTCAGTCTCATGCTTTGGGGAGCAAACTCAAAAACAACTCAATTTTCAATGTCCCCGGTGTATTTGTGGGTCTTGTTCCTAATAGCTTGTTAGATTCTGATTCAATGAGAAGCCCCACATCTCCTCTTGATGTTAAAGTGCTTTCAACTTTGGGCAACCCTGCTAGGACTCCAAAATCATCCCCCCGAGAGGGGTACCTGAGGAGTTGGGATTGCAGCAAAGTAGGCCTAAGCATACTAGATTCTTTTAAGGATTCTTCTGAATTTTCTGGGAAAATTCTACCCTTATCGGAGAGTAAGAGTCCAACTATCAGTCCCAGAATGAGGATCAAATCGCCAAATTGTCTAAACTATACTAATTCTTTTGAGGCATCTAAGTCTTTACCCAAAGATTTTTGTAAGCTTCCTTATACCCAGAATGGATCTGCTACTCACAAGGGTGATTCCAATGTTCTTTTTGAGATTGGAGAAACCTGCCTAGAGCATGAGCCATTTGGGAAAACCCGGTCTTGTTCTATGGATTCCTGCAATCCCTTTAGAAACTTCTCAGGTTTGACTCTTTCCAACAATGGTTCGGACTCTGGGGTTTTCTCAATGAATGATATGTCCACCCAACCGATCTGTCCTCATTTTATCAGAGGAAGCCATAACTCAAACTCTTCACTGCCTACAAAATTGAATTCAAACCATGTATCAATATGCTCATCTCATGAACTTGCTGAGTCTCTATCTGCTGTTGAGATAGCTGACTCTGAAGACTACACATGTGTAATTTCCCATGGTCCCAATCCCAAAACAACTCATATTTTTGGCGACCGCATCTTGGAAACTCATTCTAATGATCTTAGAATTCATGTTAAGAATGAAGAGAAGAAGAATGGAGTGTCCCCTGTGGTTAGCGGCTCACAAACTCCAAACCAGTATCACTTTAGTGATTTCTTGAGTTTTTGTTACCATTGCGACAAGAAACTGGAAGAGGGAAAAGATATTTACATATATAGAGGTGAAAAAGCATTTTGCAGTTTGACTTGCCGTGCCCTGGAGATCATGATCGATGAGGAAATGGAGAAATCCAATCCTTCTGAAGAATCTCCAGAGCGAGAAATTGGGGAGGAACTATTTGAAACTGGTATCTTCACTACTACTTAA 1404 0.4238 MHCSYLGEGLGEFWAWITQSIDQDCDPFVTFGPSPYNIIPVKFSEHQERTPRGFEIMLRKGTRSLQKDQHPMGHLTISDTNWDYYSQSHALGSKLKNNSIFNVPGVFVGLVPNSLLDSDSMRSPTSPLDVKVLSTLGNPARTPKSSPREGYLRSWDCSKVGLSILDSFKDSSEFSGKILPLSESKSPTISPRMRIKSPNCLNYTNSFEASKSLPKDFCKLPYTQNGSATHKGDSNVLFEIGETCLEHEPFGKTRSCSMDSCNPFRNFSGLTLSNNGSDSGVFSMNDMSTQPICPHFIRGSHNSNSSLPTKLNSNHVSICSSHELAESLSAVEIADSEDYTCVISHGPNPKTTHIFGDRILETHSNDLRIHVKNEEKKNGVSPVVSGSQTPNQYHFSDFLSFCYHCDKKLEEGKDIYIYRGEKAFCSLTCRALEIMIDEEMEKSNPSEESPEREIGEELFETGIFTTT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0635 467 Pfam zinc-finger of the FCS-type, C2-C2 391 440 IPR007650 -
Dere04g0635 467 ProSiteProfiles Zinc finger FLZ-type profile. 397 441 IPR007650 -
Dere04g0635 467 PANTHER FCS-LIKE ZINC FINGER 11 57 466 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0635 Dere-ChrDere04 6343378 6346309 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2095 05 31063177 31064486 Dere04g0635 04 6343378 6346309 CCT
Dere04g0635 04 6343378 6346309 Dere04g0635 04 6343378 6346309 ECH