Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0604 ATGGCTAGTACTACGTCTGAAGAAGCCTACCAAATCCCCTTAGACTTTTCTTCTGTTGAGAGCTTACCGGATTCTCATGCATGGTCTAATGCATGCTCCGACGGGTATTTCGGGTCGGGTTCCATACCCGTGGTGGACCTCACGGATCCTGATGCCATGGAAGCCATAGGCCTTGCATGCGAGAACTGGGGAGCTTTTGAATTGAAGAACCATGGCATACCGTTCCCTCTAACGCAAGACGTTGAGGCGGAGGCCAAGCGTCTCTTCGCTCTCCCAGCGGAGCAAAAGTTGAAAGCCCTAAGATCTCCCGGCGGCGCCACCGGTTACGGCCAAGCTCTGATATCACCGTTCTTCCCCAAGTACATGTGGCATGAAGGCTTCACCATTATGGGTTCTCCCTCTGACGACGCTAAAAAAATTTGGCCTCATGATCATGCACGATTTTGCGAAATAATGGAAGAATATCAGAAGCAAATGAAGAAAGTAGCAGAGGAGGTGACAGACGTGATGTTGAAGTTGGTGGGGGTACGTGAAGAAGAGAAGAAGTGGGTTGGTTCGAGCAAGAGCCTACAGGCCTTTCAATTGAACTCGTACCCGTGCTGTCCCGAGCCAGAACGAGCCATGGGTTTAGCACCTCACACAGACACGTCGCTTCTCACAATCATCCACCAAACCCAAGCCAATGGGCTCCAAATCTTCAAGGAAGGAATGGGGTGGGTTCCGGTGCACCCGAGCCCAGCTGCACTGATCGTCCTTGCTGGTGACTTCCTTCATATAATATCCAACGCTAGGTTCCCCTCTGTGCTTCATCGCGTCACTGCGAATAGCACCCCTCAACGATATTCCTTTGCTTACTTCTATGGGCCCCCACTGGACACTGTTCTTTCTCCTTCGCACTCTCTTCCTCGTTTTCGTGCCGTGACTGTGAGGGAATATACTGCTATTAAGGCCAAGAATCCGCCTAATGGACTCTCTTCCATTTCCATTTAG 990 0.5101 MASTTSEEAYQIPLDFSSVESLPDSHAWSNACSDGYFGSGSIPVVDLTDPDAMEAIGLACENWGAFELKNHGIPFPLTQDVEAEAKRLFALPAEQKLKALRSPGGATGYGQALISPFFPKYMWHEGFTIMGSPSDDAKKIWPHDHARFCEIMEEYQKQMKKVAEEVTDVMLKLVGVREEEKKWVGSSKSLQAFQLNSYPCCPEPERAMGLAPHTDTSLLTIIHQTQANGLQIFKEGMGWVPVHPSPAALIVLAGDFLHIISNARFPSVLHRVTANSTPQRYSFAYFYGPPLDTVLSPSHSLPRFRAVTVREYTAIKAKNPPNGLSSISI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0604 329 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 289 IPR005123 -
Dere04g0604 329 SUPERFAMILY Clavaminate synthase-like 13 319 - -
Dere04g0604 329 FunFam Gibberellin 3-beta-dioxygenase 1 10 315 - -
Dere04g0604 329 Gene3D - 10 320 IPR027443 -
Dere04g0604 329 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 42 313 - -
Dere04g0604 329 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 143 IPR026992 -
Dere04g0604 329 Coils Coil 152 172 - -
Dere04g0604 329 Pfam 2OG-Fe(II) oxygenase superfamily 194 289 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0604 Dere-ChrDere04 6035910 6037442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0604 53 328 Glycosyltransferase AT5G59530 30.584 3.41e-35 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0604 04 6035910 6037442 Dere05g2119 05 31296787 31298529 CCT