LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere04g0601	ATGGGTTCTTGCAAAGAACAAGAGGAAGCAAAGTGTGTGTGGGTTCATGGGCCTATCATTGTAGGTGCTGGACCCTCTGGCTTAGCCGTGGCTGCATGCCTGTCTGAACGCGGAGTACCTTCCCTCGTTCTTGAGAGAAGCGACTGCTTAGCTTCTCTTTGGAAAAACAGAACCTACGATCGTCTCAAACTTCACCTTCCCAAACGCTTCTGCGAGCTTCCATTAATGGGTTTCCCTGACAATTTCCCAAAGTACCCCACCAAGTACCAGTTCATCTCCTACTTGGAGTCCTACGCTTCACGCTTCTCAATTCACCCCCGGTTCAACCAAACCGTTCACCTGGCCGAGTTCGATCCCACCTCTGGGTTCTGGACCGTTCGAACTCAGGATTCCGAGTACATTTCTCGGTGGCTTATAGTTGCCACCGGTGAGAATGCCGACCCATTCATTCCCAAAATTGTTGGGATGGAGAACTTTCATGGACCCATTGCTCACACCAGCGTCTACAAGTCTGGTTCTAATTACAAGAACCAGAAGGTTCTGGTCATTGGTTGCGGCAATTCTGGTATGGAAGTTAGCTTGGATCTCTGTAGACACAATGCAATCCCTCACATGGTTGCTAGAAATACTGTACACGTTCTGCCTAGAGAGATGTTTGGGATCTCAACATTTGGAATAGCTATGACCCTCCTTAAATGGTTTCCTTTAAGAATAGTAGACAAGTTCCTTCTACTGGCAGCTACTTTCATCCTCGGAAACACCGATCACTACGGTCTCCGGCGGCCCAAAACCGGCCCAATCGAGCTCAAAAATGCCACCGGAAAAACCCCTGTTCTTGATGTCGGAGCTCTAGCCCAAATCAAATCCGGCAAAATCAAGGTGGTGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCCAAACTGATGAATGGACAAGAGAAGGAGTTCGATGCTATAATATTGGCAACAGGATACAGAAGCAACGTGCCTAGTTGGCTCAAGAGGTGTGAGTTTTTCACCCAAGACGGAATGCCCAAAACCCCGTTTCCAAACGGGTGGAAGGGGGAGAATGGATTGTATACGGTGGGGTTCACGAGAAGGGGTCTGCTTGGAACCGCATCGGATGCCATCAAGATTGCTCAAGACGTAGCTGACCAGTGGAGGAGTATGAAGGACAACAAGAATTACTGTAATTCCCATATTATCCTACTCGAGAGTTCATAA	1224	0.482	MGSCKEQEEAKCVWVHGPIIVGAGPSGLAVAACLSERGVPSLVLERSDCLASLWKNRTYDRLKLHLPKRFCELPLMGFPDNFPKYPTKYQFISYLESYASRFSIHPRFNQTVHLAEFDPTSGFWTVRTQDSEYISRWLIVATGENADPFIPKIVGMENFHGPIAHTSVYKSGSNYKNQKVLVIGCGNSGMEVSLDLCRHNAIPHMVARNTVHVLPREMFGISTFGIAMTLLKWFPLRIVDKFLLLAATFILGNTDHYGLRRPKTGPIELKNATGKTPVLDVGALAQIKSGKIKVVEGVKEITRNGAKLMNGQEKEFDAIILATGYRSNVPSWLKRCEFFTQDGMPKTPFPNGWKGENGLYTVGFTRRGLLGTASDAIKIAQDVADQWRSMKDNKNYCNSHIILLESS	407

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere04g0601	407	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	136	144	-	-
	Dere04g0601	407	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	175	199	-	-
	Dere04g0601	407	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	17	39	-	-
	Dere04g0601	407	FunFam	Flavin-containing monooxygenase	18	392	-	-
	Dere04g0601	407	PRINTS	FAD-dependent pyridine nucleotide reductase signature	18	37	-	-
	Dere04g0601	407	PRINTS	FAD-dependent pyridine nucleotide reductase signature	179	197	-	-
	Dere04g0601	407	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	15	392	-	-
	Dere04g0601	407	SUPERFAMILY	FAD/NAD(P)-binding domain	19	270	IPR036188	-
	Dere04g0601	407	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	33	-	-
	Dere04g0601	407	SUPERFAMILY	FAD/NAD(P)-binding domain	176	384	IPR036188	-
	Dere04g0601	407	Pfam	Pyridine nucleotide-disulphide oxidoreductase	19	210	-	-
	Dere04g0601	407	Gene3D	-	17	389	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere04g0601	Dere-ChrDere04	6002542	6004622	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere05g2124	05	31340640	31342682	Dere04g0601	04	6002542	6004622	CCT
	Dere04g0601	04	6002542	6004622	Dere04g0601	04	6002542	6004622	ECH