Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0563 ATGTCCATTGATTCCTTCCTAGAGAAGTATGGAGAAGCTGCATTCGACCATGTTCAACAATTGACCCAACAAAGGTCTCGTATTCTTGTACCTGACCCGGAAGACTACTTGAAAATGGAGCTAGACGGAAGGGAAAAAGAAACTATTGTTACTCAAGTTAGCATTGGTGGATTCAATAGTCAGGTCAAAGCGAAGGATCTTGTGAGATACTTGGAAGATAAAATTGGACTTGTAGATAGGTGTCGGCTGAAAACTTCTTGGACACCGCAAGAGTCTTATCCAGATTTTAAAATCATTAATACTGCAGAAATTGGAAGAACAGATGACTATAAGATGGTGGAGCCTCATGCGTTTGTGCATTTTGCATTACCTGGATCTGCTACTGAGGCCTGCAAATCTGCAGATCGCTGTGATCTATTTTGGCAGGATCAACATTTAATGGTTAGCTTGGGACCTGAAAATCCGTACACCTTGAACCAAAGGAGGAGAACTACAACTCCTTTTAAGTTATCTGATGTGCTTGTTGAAATTGGGACTTTGGTTAACCCAGATAACTTTTTGGTTGCCTGGAGAGGACCAGACAAAGGGGTCAACTTTTTGGTAGATCCATTTGATGGCATGTGCAAATTTTGTTTCAATAGAGATGTTGCTTTCTCTTTCAAAGGTATACAGAAAAAGGCGGTGATAAAGTGCGATTTTCAGGTGGGGTTCTTGGTTAGAGACATAAATGAGATCAGGAGATACAGTGATACGTCATATCTAGTTATTCTATTACAGCTGGCTTCATCACCTTGGGTTTGGTATAGAACAGCTGATGATGACATTGAAGAATTAGTTCCATTTGACTTGTTGGATGATGATGATCCCTGGATTAGAACCACAGATTTTACTTCTAGTGGGGCCATCGGTCGATGCAATTTTTATAGAATTTCTATCCCACCTAGGTATGGTGCAAAATTGATGAAGGCAATGAAGTATCTGAAAGACCAAAGAGTCCAGGAGATTTTACTTAGCCGACCGATTAGGATAATGACTGAACCTTCTTATGAGATGCCCATGTCGGATCCTTTCTTCTGTATTCATTTCGAAAAGGGTATCCCTTTTGAACTTATGTTCTTAATTAATGCAGTCATTCACAAAGGCATACTAAATCAACACAGGTTGTCAGATAGCTTTTTTGAGTTGTTGAGAAATCAATCTAAGGAGGTAAATGTGGCTGCATTGAAGCACTTATGTTCCTACAAGCGCCCAGTGTTTGATGCAGCCAAGAGGCTAAAAACAGTCCAAGAATGGTTGCTCAGAAATCCTAAGCTTTATGAGAGCTCTAAACAATTAGATGACATTGTTGAGGTGCGAAGGCTGGTTATTACTCCTACTAAAGCATATTGTCTGGCACCAGCAGTTGAAATGTCAAATAGAGTTCTCAGGAAATTCAAAGAAGTCGCAGATCGCTTCCTTAGAGTCACTTTTACAGATGAGGGCATGCAGACAATCAATGCAAATGCCCTCAACTATTATGTTGCTCCAATAGTGAGGAAAATCACATCAAACTCCTTCCCACAGAAGACAAATATATATAGAAGGGTGAAGACAATCTTAGAAAAGGGGTTTAAGTTGTGTGGTCGAAAATATTCATTTTTGGCCTTCTCAGCAAACCAATTGAGAGATCGATCTGCTTGGTTTTTTGCCGAAGACGAGAACAGAACTTGTGATAATATCAGAGATTGGATGGGCAAATTCAACCAGAGTAATGTTGCAAAGTGTGCTGCTAGGATGGGACAGTGCTTCTCATCCACCTATGCAACTGTGGAGGTTGCAGCACATAATATAATACCTGATATTAAGAGGAATAACTATGTTTTCTCTGATGGAATTGGTCTCATTACTCCTGATCTTGCTAGTGAAGTAGCTGAAAAATTGAAATTGGATGATGTACCCTCAGCGTATCAGATCAGATATGCTGGTTTTAAAGGGGTTGTGGCCTGTTGGCCAGCTAAAGGGGATGGGTCCCAACTTTCACTAAGACCAAGTATGAACAAATTTGAATCTACCCACACTACCTTGGAGATCTGTTCTTGGACTAGGTTTCAGCCTGGTTTCCTTAATCGGCAGATTGTGACACTCCTTTCAGCTTTGAATGTGCCTGATGAAGTATTTTGGAAAATGCAGGAGGCAATGGTTTCTAAGTTAAATCAAATGCTTGTGGATGCCGATGTGGCTTTTGATGTTCTCACTAGGTCTTGTGCTGAGCATGGAAATGCTGCAGCAATAATGTTAAGTGTTGGATTTAGTCCCCAATTGGAACCTCATCTAAGAGGCATATTAACCTCTGTACGTGCTGCACAGCTCTGGGGCCTTAGAGAAAAAGCTAGGATCTTTGTTTCATCTGGGCGATGGTTGATGGGTGTCTTTGATGAGTTGGGTGTGCTTGAATATGAACAGTGCTTCATTCAAGTCTCTACTCCGTCGCTTGAAAATTGTTTCTCAAAGCACGGTGCAAGGTTTGAAGAGATAAAGAAGCTGCAAGTAATTAAAGGATTTGTGGTGATAGCTAAAAATCCATGTCTCCATCCCGGAGATGTGAGAGTTTTGGAAGCAGTTGATGCTCCTTCTTTGTATCATTTACATGATTGTCTTGTTTTCCCCCAAAAGGGTGAGAGACCGCACACAAATGAAGCTTCTGGAAGTGACCTTGATGGGGACCTATATTTTGTCACATGGGATGAGAATCTTATTCCACCCAATAAGAAGAGTTCTGCACCTATGGAGTATTCATCTCAAGAAAGCAAACATCATACTCGTAAAGTCACCACTCAGGACATCATAGATTTTTATGTCCGAAATATCGTAAATGATAGTTTGGGGACAATCTGCAATGCACATGTGGTACATGCTGATCGCAGCAATATTGGTGCGTTAGATGAGAAATGCATAACCCTGGCAGAGTTAGCAGCCACAGCTGTTGATTCTCCAAAGACTGGGAAGAGTGTCACAATGCCTTATCATTTAAAACCAACACTATACCCCGATTTTATGGGGAAAGCGCCAAACCAGTCATATATATCCAAGAAAATCCTGGGTAGGCTTTACCGGCGAATCAAGGATGCTTATGATGAAGATATTGATGCTGCTGGTTCAAACCATGTGCTAGGTGATATACCTTATGATACTGATCTTTGGGTTCCGGGATCTGCTGAGTTTATTATTGATGCATGGGAACAGAAGCGTTCGTATGATGGTCAGTTGAATGGACTGCTAAGTCAATACAAAGTGGAAAGAGAAGAAGAAGTTGTAACCGGACAGATCTGGTCCATGCCCAAATACAGCAGCAGGAAGCAAGGGGATCTTAAGGAAAGGCTCAAGCATGCATATAGTGCCCTGAAGAAAGAATTTAGGCAAACTTTCGAGAAACTTAATACAGATATAGAAGAATTAAATGATGAAGAGAAACATTTATTGTATGAACAGAAGGCATCAGCCTGGTACCAGGTCACATATGATCCTGAATGGGTGAAAAAATCCCTCAATCTTCGAGATAAATATCCAGAGAATCAACAGTCTAATGGTCTTGGAAATAAAGTAATGCTGAGTTTCCCTTGGATTGCAGTTGATTACCTGGCTTGCATTAAGATAAGGAATCGGGGATTTGGCAATGCTGATTCAACTATGCCAGTTGATTCTCTGGCAAAGTACCTATCTGAAAGGCTGTAA 3711 0.4091 MSIDSFLEKYGEAAFDHVQQLTQQRSRILVPDPEDYLKMELDGREKETIVTQVSIGGFNSQVKAKDLVRYLEDKIGLVDRCRLKTSWTPQESYPDFKIINTAEIGRTDDYKMVEPHAFVHFALPGSATEACKSADRCDLFWQDQHLMVSLGPENPYTLNQRRRTTTPFKLSDVLVEIGTLVNPDNFLVAWRGPDKGVNFLVDPFDGMCKFCFNRDVAFSFKGIQKKAVIKCDFQVGFLVRDINEIRRYSDTSYLVILLQLASSPWVWYRTADDDIEELVPFDLLDDDDPWIRTTDFTSSGAIGRCNFYRISIPPRYGAKLMKAMKYLKDQRVQEILLSRPIRIMTEPSYEMPMSDPFFCIHFEKGIPFELMFLINAVIHKGILNQHRLSDSFFELLRNQSKEVNVAALKHLCSYKRPVFDAAKRLKTVQEWLLRNPKLYESSKQLDDIVEVRRLVITPTKAYCLAPAVEMSNRVLRKFKEVADRFLRVTFTDEGMQTINANALNYYVAPIVRKITSNSFPQKTNIYRRVKTILEKGFKLCGRKYSFLAFSANQLRDRSAWFFAEDENRTCDNIRDWMGKFNQSNVAKCAARMGQCFSSTYATVEVAAHNIIPDIKRNNYVFSDGIGLITPDLASEVAEKLKLDDVPSAYQIRYAGFKGVVACWPAKGDGSQLSLRPSMNKFESTHTTLEICSWTRFQPGFLNRQIVTLLSALNVPDEVFWKMQEAMVSKLNQMLVDADVAFDVLTRSCAEHGNAAAIMLSVGFSPQLEPHLRGILTSVRAAQLWGLREKARIFVSSGRWLMGVFDELGVLEYEQCFIQVSTPSLENCFSKHGARFEEIKKLQVIKGFVVIAKNPCLHPGDVRVLEAVDAPSLYHLHDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPNKKSSAPMEYSSQESKHHTRKVTTQDIIDFYVRNIVNDSLGTICNAHVVHADRSNIGALDEKCITLAELAATAVDSPKTGKSVTMPYHLKPTLYPDFMGKAPNQSYISKKILGRLYRRIKDAYDEDIDAAGSNHVLGDIPYDTDLWVPGSAEFIIDAWEQKRSYDGQLNGLLSQYKVEREEEVVTGQIWSMPKYSSRKQGDLKERLKHAYSALKKEFRQTFEKLNTDIEELNDEEKHLLYEQKASAWYQVTYDPEWVKKSLNLRDKYPENQQSNGLGNKVMLSFPWIAVDYLACIKIRNRGFGNADSTMPVDSLAKYLSERL 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0563 1236 Pfam RNA dependent RNA polymerase 456 1033 IPR007855 GO:0003968
Dere04g0563 1236 Coils Coil 1128 1155 - -
Dere04g0563 1236 PANTHER RNA-DEPENDENT RNA POLYMERASE 49 1233 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0563 Dere-ChrDere04 5623151 5629046 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0563 04 5623151 5629046 Dere04g0563 04 5623151 5629046 ECH