Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0551 ATGGCGCCGAGCACGATCCGGAAGGCGATTGGGGCGGTGAAGGACCAGACTAGTATTGGAATAGCGAAGGTGGCTAGCAATTTGGCACCGGAGCTCGAGGTGGCGATCGTCAAGGCGACGAGTCACGACGATGACCCAGCTAGCGAGAAGTACGTACGCGAGATCTTGAGCTTGGTGTCTTTTTCTCGTGGCTATGTTAATGCTTGCGTTGCCGCGGTGTCCAAGCGTTTGGGGAAGACCCGGGACTGGATTGTGGCGCTTAAGGCCCTGATGCTTGTGCACAGGTTGATGAATGAGGGTCCTCCTTTGTTTCAAGAGGAGATCTTGTATGCCACGAGGAGGGGAACCAGGCTTCTCAACATGTCCGATTTCAGGGATGAGGCTCACTCTAGCTCCTGGGATCATTCGGCTTTCGTCAGGACCTATGCCATGTATCTGGATCAACGGCTCGAGTTGATGCTGTACGATAGGAAAAGTGGGAGTGTTGGGGGTGGTAGTGGCGGGGGTAGTGTGGACGATAGATTTGGGGGTAGAGATAATTTTCGGTCGCCGCCTCCGAGACCATATGAAAATGAGTATGGATATGGAGATTTTAGGGGGGAAAGTGGGTACGGAAGTGGGATGCGTCGGACGAGATCGTTTGGGGATATGAGCGAAACGGTGGGCCGTGAAGGTAGAGAGGAGAAAAAGGTTGTGACTCCATTGAGGGATATGATGCCTGAGAGGCTTTTTGGCAAGATGGGTCATCTGCAGAGGCTGTTGGATAGATTCTTGGCTTGTAGGCCTACGGGATTGGCAAAGAATAGTAGGATGATTTTGATTGCATTGTATCCCGTTGTGAAGGAGAGCTTTCAGTTGTATGCCGATATTTGCGAGGTTTTGGCTGTTTTACTCGATAAATTCTTTGATATGGAATACCCAGATTGCGTTAAGGCTTTTGATGCTTATGCCAGTGCAGCTAAGCAGATCGATGAGCTTGTTGCCTTCTACAATTGGTGCAAAGATACTGGTGTGGCAAGATCATCTGAATACCCAGAAGTTCAGAGGATTACTAGTAAATTACTGGAGACACTGGAGGAGTTTGTGAGAGATAGGGCAAAGAGACCAAAAAGTCCAGAGAGGAAGGAGGAACCTCAGCCTGTGGTTAAAGAAGAGGAGCCTGTACCAGATATGAACGAAATAAAGGCACTGCCTCCACCTGAGAATTACACTCCGCCTCCTCCACCTGAGCCAGAACCTAAGCCACCACAGCCACAAGTAACAGAGGACTTGGTGAATCTGAGAGATGATTTAGTCACTGCAGATGATCAAGGCAATAGATTGGCTTTGGCACTCTTCGCTGGTGCACCACCTAATAATGCAAATGGATCATGGGAGGCATTCCCATCAAACGGACAGCCAGAAGTGACTTCGGCTTGGCAAACCCCTGCTGCAGAACCTGGCAAGGCCGATTGGGAATTGGCATTGGTCGAGACTGCTAGCAATTTATCAAAGCAAAAGGCAGCTTTAGGTGGTGGGCTTGATCCGTTATTGTTGAATGGCATGTACGATCAAGGAATGGTGAGACAGCACGTCAGCACTGCCCAACTGAGTGGAGGGAGTGCAAGCAGTGTGGCATTGCCAGGACCCGGAAAGAACACAACCCCTGTTTTAGCTCTCCCAGCTCCGGATGGATCTGTGCAGCCAGTTAATCAGGATCCATTTGCTGCATCATTAAGCATTCCTCCCCCCTCATATGTGCAAATGGCTGACATGGAGAAGAAGCAGCATTTACTTGTACAGGAGCAGCAGGTGTGGCAGCAGTATGCGAGGGAAGGGATGCAAGGTCAAGCTAGCTTGGTCAAAATCAATGGAACTGGATATTATGCCGGGGGTCCTATGCCAACGATGCCTTATGGGATGCCCCCAGTCAATGGAATGGGACCTCCCGCCGGGTATTACCATGCACCTTACTGA 1956 0.5031 MAPSTIRKAIGAVKDQTSIGIAKVASNLAPELEVAIVKATSHDDDPASEKYVREILSLVSFSRGYVNACVAAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLYDRKSGSVGGGSGGGSVDDRFGGRDNFRSPPPRPYENEYGYGDFRGESGYGSGMRRTRSFGDMSETVGREGREEKKVVTPLRDMMPERLFGKMGHLQRLLDRFLACRPTGLAKNSRMILIALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEPQPVVKEEEPVPDMNEIKALPPPENYTPPPPPEPEPKPPQPQVTEDLVNLRDDLVTADDQGNRLALALFAGAPPNNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKAALGGGLDPLLLNGMYDQGMVRQHVSTAQLSGGSASSVALPGPGKNTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMADMEKKQHLLVQEQQVWQQYAREGMQGQASLVKINGTGYYAGGPMPTMPYGMPPVNGMGPPAGYYHAPY 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0551 651 SMART enth_2 30 160 IPR013809 -
Dere04g0551 651 MobiDBLite consensus disorder prediction 399 418 - -
Dere04g0551 651 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Dere04g0551 651 MobiDBLite consensus disorder prediction 363 391 - -
Dere04g0551 651 SUPERFAMILY GAT-like domain 234 364 - -
Dere04g0551 651 Pfam ANTH domain 31 364 IPR011417 GO:0005543
Dere04g0551 651 FunFam putative clathrin assembly protein At2g25430 229 374 - -
Dere04g0551 651 MobiDBLite consensus disorder prediction 363 420 - -
Dere04g0551 651 FunFam Clathrin coat assembly protein 3 156 - -
Dere04g0551 651 MobiDBLite consensus disorder prediction 162 194 - -
Dere04g0551 651 Gene3D - 2 156 IPR008942 -
Dere04g0551 651 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 594 IPR045192 GO:0048268|GO:0072583
Dere04g0551 651 CDD ANTH_N_AP180_plant 32 152 - -
Dere04g0551 651 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Dere04g0551 651 Gene3D ANTH domain 226 375 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0551 Dere-ChrDere04 5526326 5528281 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0551 04 5526326 5528281 Dere04g0551 04 5526326 5528281 ECH