Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0546 ATGTTGAGACAGAGTCCTCCCAAACACAGGCACGATGGGACTTCGCCGCTGCCTCTCGGGATGGACTGGAGTCCTCCACCACGAAATTGGAATGGGCGGGATACAGTATGGCCACACAATCATCGTACAGGTTGGAGTTATTGTGTCACAGTACCTTCTTGGGTCTTTGTTCCAAAATCAAGAAATTCAGATCCTATAGTGTTCTACAGGGTTCAAGTTGGTCTACAGTCACCAGAAGGAATCACATCCCTCCATAGAGTACTGAGAAGGTTTAATGATTTTCTTAAGTTGTTTGCAGATCTTAAAAAGGAGTTTCCCAGGAAAAATATTCCACCAGCTCCACCCAAAGGGCTTTTGCGATTGAGAAGCCGAGCATTGTTGGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCACCAAGCTGTTGTCTGACATAGATATATCAAGATGTGCTGCAGTTGCATCCTTTCTTGAATTAGAGGCTGCAGCTAGATCTTCATTCCAAGATGCAAATCAGCAGAATTCAGAATCAGATCCTGCTTCCAATAACACAACTTTTTCAGTGCAATCACCTGTCCATTCAACTTTATCATTAGTTGCTGGCAGTTCATCTATTGCATCAGATTATGGTAGTGATACTGCATATGAGCCATCTGAACTTGGAACACCAGGGGTTGGGCAGGATGATAATTCGGAAGTTGGCACAGATGATTTAACATTGGATGAAGATATGACAAATTCAATGGAAAAGCTTGTCAAGTATAGCATATCAAATATTGATGAGGGTTTGTTTATGGGTCAGACTATTCTAGAGCAACTGGAAGGCCTTCCTAGGCATAAAGTAAATGCCAGACATTTCAACTATGTTGCAGAGAACAAAAATAATGGAAATGCTTTTAATGCTTCTCTTTTAGCTAAGAACACGATGGAGCTTTTCTCTGAACATGAGCATGCTAAGGTTATTGGTCATAATCGGAAGCTTTCAAATGAGAGTGCTGGAAGTGATGGAAGCTCTTTGCGAGGTAGTGACTTTTCTACTTCTGGAATTCCAAATTCATCTGGTGATGGCTCTCTTGACCTTCCTGGAAATGCTGTGGTACCCAGAACAACAGATGTTTTAGGTCATGCAGAGTTGCAGTTTAGTGATGATGCTCAAGTAGTTCTTCCGCTGGATCAGCGCCATAAATTGAATAGGATTCTTTTAACCATGCAGAGAAGGATAGGCACTGCAAAAACTGACATGGAGGACCTTATAGTTAGATTAAACCAAGAAATAGCTGCTAAGGATTTTCTTGCAACAAAGGTCAAGGATTTGGAAGTAGAACTTGAAACTACCAAACAGAAGAGTAAAGAAAACTTGCAACAGGCTATTCTGATTGAGAGGGAGAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTCGGCGAAAGTCGTTGGAAATGGAGATGAAACTAAAGTCTGAAGTGGGTGAAAATGCATGTCAGAGTTTTACAAAGGAATCAGTTAAGGAGAAAGAACTGTTGCAGACTTTAAATGCCACAAAAGATCAGCTGGAAATTTTGTCAAAACAGTATGATCAGCTAGAAGCAAAATCCAAAGCTGATGTTAAAGTCCTGGTTAAAGAGGTCAAATCTCTCCGAAATTCCCAAACAGAATTGAAGAAGGAACTTAGTGAGTCAATAAAGGAGAAGTGTGAGGCTGAGAAACTTCTTCAACATGAAAGAGAGAGGAGGGAACATGCCGAATCTGCTTCAAGAAATCTTCTGCAGAAATGCAGGCTTCTTTTCAACCAGCTTCAACAGTGCAACATCAATTATCCTACAGACGATCAAGATAACACTATCATGAACTCATCATCTTTTGAAGACACTGCAAATCAATTAGCAATATCCGATGATAAAATTGGGGTTCTGCTAGCAGAGGTAGAAAACTTAGGGAAGGACCGGGGAAATGCTGCTTCTGATGTGGATAAAATCAATGACATAAAAGATGCTCTCATCTGTGATGATGAATTGCAAAAGATCATCGCAGATTTATTCATCGACAATGCTAGATTGAGAAAAAAGATGAATTGTGTTACAAGGAATGCTCTCAAATTAGACATGTCAGCAGGTGATGATTCTCCAGTGGAGACCGTAACAAGTAATAGTTGA 2154 0.4081 MLRQSPPKHRHDGTSPLPLGMDWSPPPRNWNGRDTVWPHNHRTGWSYCVTVPSWVFVPKSRNSDPIVFYRVQVGLQSPEGITSLHRVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLLRLRSRALLEERRCSLEEWITKLLSDIDISRCAAVASFLELEAAARSSFQDANQQNSESDPASNNTTFSVQSPVHSTLSLVAGSSSIASDYGSDTAYEPSELGTPGVGQDDNSEVGTDDLTLDEDMTNSMEKLVKYSISNIDEGLFMGQTILEQLEGLPRHKVNARHFNYVAENKNNGNAFNASLLAKNTMELFSEHEHAKVIGHNRKLSNESAGSDGSSLRGSDFSTSGIPNSSGDGSLDLPGNAVVPRTTDVLGHAELQFSDDAQVVLPLDQRHKLNRILLTMQRRIGTAKTDMEDLIVRLNQEIAAKDFLATKVKDLEVELETTKQKSKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSEVGENACQSFTKESVKEKELLQTLNATKDQLEILSKQYDQLEAKSKADVKVLVKEVKSLRNSQTELKKELSESIKEKCEAEKLLQHERERREHAESASRNLLQKCRLLFNQLQQCNINYPTDDQDNTIMNSSSFEDTANQLAISDDKIGVLLAEVENLGKDRGNAASDVDKINDIKDALICDDELQKIIADLFIDNARLRKKMNCVTRNALKLDMSAGDDSPVETVTSNS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0546 717 MobiDBLite consensus disorder prediction 327 358 - -
Dere04g0546 717 Coils Coil 536 563 - -
Dere04g0546 717 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 708 IPR044588 GO:0015031
Dere04g0546 717 MobiDBLite consensus disorder prediction 210 237 - -
Dere04g0546 717 MobiDBLite consensus disorder prediction 323 363 - -
Dere04g0546 717 SMART PX_2 43 160 IPR001683 GO:0035091
Dere04g0546 717 FunFam Phox (PX) domain-containing protein 46 183 - -
Dere04g0546 717 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Dere04g0546 717 Coils Coil 428 455 - -
Dere04g0546 717 MobiDBLite consensus disorder prediction 168 187 - -
Dere04g0546 717 Pfam PX domain 85 158 IPR001683 GO:0035091
Dere04g0546 717 Coils Coil 504 531 - -
Dere04g0546 717 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Dere04g0546 717 MobiDBLite consensus disorder prediction 1 25 - -
Dere04g0546 717 Coils Coil 571 591 - -
Dere04g0546 717 Gene3D - 46 186 IPR036871 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0546 Dere-ChrDere04 5491010 5496416 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0546 04 5491010 5496416 Dere04g0546 04 5491010 5496416 ECH