Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0540 ATGAACAGGAGTCATAGGGAAATGGAGAAGCGTTTCCGAGTATGGGTTTACAAGGAAGGAGAGGCACCCATATTTCACAATGGACCTTTGAACGACATATACTCAACAGAAGGGCAATTCATGGACGAATTTGAAAGTGGGAAGAGTCCCTTTTTAGCTAAGGACCCCAACGAGGCCATCACTTTCTTCCTTCCAGTCAGTGTAGTCAATATCATACTCTACGTCTACAGACCTTACACCAATTACTCCCGGATACGCCTTCAGAACATTTTCAAAGATTACATCGATTTGGTGTCTCACAGATACCCATTTTGGAATAAAACAGAAGGAGCCGACCATTTTATGCTTTCTTGCCACGACTGGGCCCCAGATGTTTCAGCTGCTCATCCAAACCTCTTTAAGCACTTGATTAGGGTTCTTTGCAATGCGAATAGCTCAGAAGGTTTTCAACCAAAGAGAGACGTGTCGTTGCCTGAAATCAAAATCCCATATGGAGAATTGGGTCCTCCTTACATTACGAAACCTCCAAACAGCCGAACCATCTTGGCCTTCTTCGCCGGTGGTGCTCATGGCAGCGTAAGAAAAACACTATTTAGGTATTGGAAATACAAAGACAACGATATTCAAGTTCATGAGTACCTGCCTAAAACCTCAAACTACACTGAATTACTGGGAGAAAGCAAGTACTGCTTGTGCCCTAGTGGATATGAAGTGGCAAGCCCCAGAGTTGTTGAAGCCATATACGCAGGCTGTGTCCCTGTGATCATATCTGATAATTACGTATTGCCATTTAGCGAGGTTCTTGATTGGACCCAGTTTTCGGTTCACATTCCGGCCTCAAAGATACCAGACATTAAAGAGATCTTGGAAGGAATTTCAATGGAGGAGTATCTGGAGAAGCAAAAGAAAGTGACAGATGTGCAGCGACATTTTGTGGTTCATCGGCCTGCGAAACCCTATGATCTAATGTACATGGTGATGCACTCGGTTTGGCTGAGGAGGCTAAATTTAAGGCTCCCACACACATAA 1029 0.4412 MNRSHREMEKRFRVWVYKEGEAPIFHNGPLNDIYSTEGQFMDEFESGKSPFLAKDPNEAITFFLPVSVVNIILYVYRPYTNYSRIRLQNIFKDYIDLVSHRYPFWNKTEGADHFMLSCHDWAPDVSAAHPNLFKHLIRVLCNANSSEGFQPKRDVSLPEIKIPYGELGPPYITKPPNSRTILAFFAGGAHGSVRKTLFRYWKYKDNDIQVHEYLPKTSNYTELLGESKYCLCPSGYEVASPRVVEAIYAGCVPVIISDNYVLPFSEVLDWTQFSVHIPASKIPDIKEILEGISMEEYLEKQKKVTDVQRHFVVHRPAKPYDLMYMVMHSVWLRRLNLRLPHT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0540 342 Gene3D Glycogen Phosphorylase B; 173 313 - -
Dere04g0540 342 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 9 330 IPR004263 GO:0006486|GO:0016757
Dere04g0540 342 Pfam Exostosin family 9 290 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0540 Dere-ChrDere04 5437298 5438526 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2185 05 31955885 31958531 Dere04g0540 04 5437298 5438526 CCT
Dere04g0540 04 5437298 5438526 Dere04g0540 04 5437298 5438526 ECH