Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0459 ATGATGAGCTTAATCCAGAAAGGATCCCAAACAGACGCGAAGCTAAGCTCCCCGAACAAGGTAACCACTCTGAATCCAAATGCAGCAGAGTTTATTCCCTTTGCCCTTAGATCAGTGCCATCTGGAAGTACCAGATCGGTAGATGCAACAAGGTTCAATGCTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATCGATCAGAGTCATCCATTTCAAATAATTCAGATGATGAGGTCCACCAATACTGGCGTTGTCAGCTTCCTGATGATATCACCCCAGACTTCAAGGTCATGGGAGAAGATGAACCCCAAGGTCTTAACAACCTCTCTTTAGCGGCCTTATCTATACATGATGATGAAGCATCAAGGTTTCCTTCTTCTAATGGAAATAGATATCTTTTAAATGAGCAGCAGGAATTATCTCCACATCACCTTAATGGAAATAGCTTTGCCGATAAATTAAGGTTTTCCAATTCAACCTATAGGCAGGACCCATCTTCAGTGAGCTTTCTGAACACATTAACGAAACCTTGGGACGTGCAAATTGGGAATACCAACCAGCTTGTTGGCAGTGGTCAAGAGGGGCTTACTTATGACGAGAACTCTGGACATGGATTCTTAAATGATCTTTTGGGTGAGCAAGCTATAGTGGATGGTACTGATATGAACCCTTTGGAGTTTTTGGCTTCTCAATTCCCTGGTTTTGCTTCTGAAAGCCTTGCAGAAGTTTACTTTGCCAATGGATGTGATTTAAATCTGACCATTGAGATGCTCACTCAGTTAGAGCTTCAAGTTGATGGCAATTTTAATCAGAATCTAAATTCAAAGACTCTTTCGGCTTCCAATCTGAGTGCAATGGACTTTCCTGCACTTACTTCTCCAGATGGCCAGCGTACTTCCGTTAAATATGCTGCAGATAATGTCCAACAAAGTGGCAATCCTTTCAGATCGTCTGACAAGGACATGCTCTTTTTCAAGTCTAGCTCTTCATTTCCATCTAGAGGTGCTATTGACTTTGCTTCTGCTGTCAGGAAATTGGCTTCCCAGGATTCTGGTATATGGAAGTGTGATAAAAATGGTTCTGGTGATGCTGCTATTGGCTCAAGTAGAAGTTCTCATGTTCTGGCTAGTGCCTACAATGGTGGTCAGGGAAGAGCCAATTTTGGCGATAGGTTGCAGAACCGTGGTTCAGCTCGAGCAGCTCCTGTTTGGCTTGAAACTGGTGATGCAGTTGCAAATATGTATTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCACGCTTGCGTAATACATATTTTGAGCAGGCACGGCAAGCATACCTAATAGGAAATAAGGCCCTAGCAAAGGAGCTCAGTGTTAAAGGGCAACTGCACAACATGCACATGAAAGCAGCTCATGGAAAGGCTCAAGAATCTATTTATCGCCAGAGGAATCCAGTTGCTCCAGAGATGCAGGGCAACGGAAGAGGGCATGAGAGGATGATAGACCTACATGGGCTGCATGTAAGTGAAGCCATTCATGTTCTAAAACATGAATTGGGTGTCCTAAGAAGCACAGCCAGAGCTGCCGAGCAGCGCTTGCAGGTTTATATATGTGTTGGTACGGGTCACCATACCCGGGGTTCCCGCACTCCTGCAAGACTTCCAGTAGCTGTACAGCGTTATCTACTTGAAGAAGAGGGTCTTGACTACACGGAACCACAGCCAGGCCTGCTTCGAGTTGTGATATATTGA 1731 0.4489 MMSLIQKGSQTDAKLSSPNKVTTLNPNAAEFIPFALRSVPSGSTRSVDATRFNAAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVMGEDEPQGLNNLSLAALSIHDDEASRFPSSNGNRYLLNEQQELSPHHLNGNSFADKLRFSNSTYRQDPSSVSFLNTLTKPWDVQIGNTNQLVGSGQEGLTYDENSGHGFLNDLLGEQAIVDGTDMNPLEFLASQFPGFASESLAEVYFANGCDLNLTIEMLTQLELQVDGNFNQNLNSKTLSASNLSAMDFPALTSPDGQRTSVKYAADNVQQSGNPFRSSDKDMLFFKSSSSFPSRGAIDFASAVRKLASQDSGIWKCDKNGSGDAAIGSSRSSHVLASAYNGGQGRANFGDRLQNRGSARAAPVWLETGDAVANMYSELREEARDHARLRNTYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVAPEMQGNGRGHERMIDLHGLHVSEAIHVLKHELGVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPVAVQRYLLEEEGLDYTEPQPGLLRVVIY 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0459 576 ProSiteProfiles Smr domain profile. 494 576 IPR002625 -
Dere04g0459 576 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 2 576 - -
Dere04g0459 576 MobiDBLite consensus disorder prediction 1 21 - -
Dere04g0459 576 Pfam Domain of unknown function (DUF1771) 414 477 IPR013899 -
Dere04g0459 576 CDD CUE_CID7_like 222 263 IPR041806 -
Dere04g0459 576 Gene3D - 461 575 IPR036063 -
Dere04g0459 576 SMART SMR_2 491 576 IPR002625 -
Dere04g0459 576 SMART DUF1771_2 413 478 IPR013899 -
Dere04g0459 576 SUPERFAMILY SMR domain-like 492 574 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0459 Dere-ChrDere04 4620808 4624090 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0459 04 4620808 4624090 Dere04g0459 04 4620808 4624090 ECH