Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0453 ATGCACGGAGGTGCGTCCTTTCCTGTCTTTGTTGACTGCCTCTGCCTCATCCCATTGCCTATGGAATTGTGCTCTTTCTCAGGGAATCCTGCTCTTTGCTTCCATCTCTTTCCTTTACCTTCAGACTCAACCAATCCGCCAAATCTAGCAGTCTATCTCCATCTCCGCACCTCTGAAAAAGAGACCCTTCGCTACTTTCTTTTTCCTTTTTCAGGTGAACTCAATCCCACTAATGTAAAGAATATGGGCTTACTCTGCAGCAGAAATCGTCGTTATAATGATTCTGACGCTGAAGAAAATGCACAGGCTGCAGAAATTGAAAAGAGAATAGAGCAAGAAACGAAGGCTGAAAAGCATATTCAGAAACTTCTACTGCTTGGTGCTGGAGAGTCAGGGAAGTCCACAATCTTTAAACAGATAAAACTATTGTTTCAAACCGGCTTTGATGAGGCAGAGCTCAAAAGCTACATACCAGTCATTCATGCTAACGTGTATCAGACAATAAAAATACTGTATGATGGGTCAAAGGAATTAGCTCAAAATGAAACTGAGTCTTCAAAGTATGTGATATCCAATGAAAACAAGGATATTGGAGAGAAACTATCAGAAATTGGAGGCAGGCTGGATTACCCACGTCTCACCAAGGAACTTGTGCAGGAAATAGAGACTCTGTGGAAAGATTCTGCAATTCAGGAAACATATGTCCGTGGTAATGAGCTCCAAGTTCCAGATTGTGCCAATTATTTTATGGAAAATTTGCAGAGACTGTCTGATGCTAATTATGTTCCAACAAAGGATGATGTTCTGTATGCAAGAGTTCGTACCACTGGTGTTGTAGAGATCCAGTTCAGCCCAGTTGGAGAAAACAAAAAAAGTGGGGAGGTGTATAGGCTCTTTGATGTTGGAGGCCAAAGAAATGAGAGGAGAAAATGGATTCATCTGTTTGAAGGAGTTACTGCTGTAATATTCTGTGCTGCTATCAGCGAGTATGATCAAACACTTTTTGAGGATGAAAACAAGAACAGAATGACGGAGACCAAGGAGCTTTTTGAGTGGGTCCTAAAGCAACCATGTTTTGAGAAAACATCCTTCATGCTATTTTTAAATAAGTTTGACATATTTGAGAAGAAGATCCTAAAAGTCCCGCTTAATGTATGCGAATGGTTCAAAGATTACCAGCCAGTTTCCTCTGGGAAGCAAGAGATAGAGCATGCATACGAGTTTGTGAAGAAGAAATTTGAGGAATTGTATTTTCAGAGCACTGCACCTGATCGTGTAGATCGTGTCTTTAAGATCTATCGTACCACTGCCCTTGATCAGAAGCTTGTGAAGAAGACTTTCAAGCTTGTTGACGAGTCTTTGAGGCGGAGGAATCTCTTCGAAGCTGGCTTATTATGA 1398 0.412 MHGGASFPVFVDCLCLIPLPMELCSFSGNPALCFHLFPLPSDSTNPPNLAVYLHLRTSEKETLRYFLFPFSGELNPTNVKNMGLLCSRNRRYNDSDAEENAQAAEIEKRIEQETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYIPVIHANVYQTIKILYDGSKELAQNETESSKYVISNENKDIGEKLSEIGGRLDYPRLTKELVQEIETLWKDSAIQETYVRGNELQVPDCANYFMENLQRLSDANYVPTKDDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLFEDENKNRMTETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSSGKQEIEHAYEFVKKKFEELYFQSTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDESLRRRNLFEAGLL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0453 465 CDD G-alpha 121 459 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 SMART galpha_1 100 464 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 462 IPR027417 -
Dere04g0453 465 SUPERFAMILY Transducin (alpha subunit), insertion domain 148 273 IPR011025 GO:0007165
Dere04g0453 465 PRINTS Alpha G protein (transducin) signature 122 137 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 PRINTS Alpha G protein (transducin) signature 296 313 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 PRINTS Alpha G protein (transducin) signature 364 373 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 PRINTS Alpha G protein (transducin) signature 261 283 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 PRINTS Alpha G protein (transducin) signature 318 346 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 93 461 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 Pfam G-protein alpha subunit 103 452 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 Gene3D - 149 274 IPR011025 GO:0007165
Dere04g0453 465 FunFam Guanine nucleotide-binding protein alpha-1 subunit 149 274 - -
Dere04g0453 465 FunFam Guanine nucleotide-binding protein alpha-1 subunit 260 452 - -
Dere04g0453 465 PRINTS Plant G protein alpha subunit signature 158 171 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dere04g0453 465 PRINTS Plant G protein alpha subunit signature 417 429 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dere04g0453 465 PRINTS Plant G protein alpha subunit signature 108 117 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dere04g0453 465 PRINTS Plant G protein alpha subunit signature 173 187 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dere04g0453 465 PRINTS Plant G protein alpha subunit signature 281 296 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dere04g0453 465 PRINTS Plant G protein alpha subunit signature 197 211 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dere04g0453 465 PRINTS Plant G protein alpha subunit signature 400 415 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dere04g0453 465 PRINTS Plant G protein alpha subunit signature 351 362 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dere04g0453 465 ProSiteProfiles G-alpha domain profile. 119 465 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere04g0453 465 Gene3D - 122 452 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0453 Dere-ChrDere04 4566806 4573162 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0453 04 4566806 4573162 Dere04g0453 04 4566806 4573162 ECH