Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0451 ATGGGTATTCAAAGAGCATCCTTGGCCATTATCTTAACATGGCTTGCTGTGTTTGAAAGGTGTTTATATCATGTCAATGGTGAATTAGATTATAAGGATGCTCTCACTAAGTCCCTTATATTCCTAGAGGCACAACGCTCGGGAAAGCTCCCTCCTAATAACAGGGTGCCTTGGAGAGGAGACTCAGCACTCGATGATGGAAAACTTGCTAATGTTGACCTTTCTGGAGGATATTATGATGCAGGAGATAATGTGAAGTATGGGTTGCCCATGGCTTTCACCGTTACTAGTCTTTCATGGGCTGCAATTTATTATAAGAACGAATTAGAAAATGCAAAAGAAATGGATAATGTTCGTGATGCCATTAAATGGGGCACCGATTTTTTCCTAAAAGCTGCTTCTCGACGTGGTCGATTATATGTGCAGGTAGGGGACCCTGAAGAAGATCACCATTGTTGGGTTCGACCAGAAAATATGAAGACAAAAAGAACAGTTCTGCAAATTGATAGTAACACGCCCGGGTCAGAGATTGCAGCTGAAACTGCAGCAGCTATGGCTTCTTCTTCCATTGTTTTCAGAAAAATAGATCGTCGATATTCTCGACGTCTCCTCAATAAGGCCAAATTGCTTTTTAAACTAGCAAAATCACATAAAGGAACTTATGATGGAGAATGTCCCTTTTACTGCTCATTCTCTGGCTATAATGATGAAATGTTGTGGGCAGCAACATGGCTATATATTGCTACTAGGAAGTCGATGTACTTGAAGTACGTTCAAGAGGAATCCATAAGTGCTTATGTGAATGAGTTTAGTTGGGATCTTAAATATGCAGGAGCTCAAATGCTTCTCACTAAGTTACATTATGAAGGAGAAAAGAACCTGGAAACATTCAAATATCAAGCTGATAGCTTCATATGCTCAGTCCTTCCTGATAGTCCTTACAGTCAGATTAAATTAACTCCCGGTGGCGCCATTCACTTAAGGGATGGAGCCAACACGCAATACGTGACAGGCACAGCTATGCTATTCACATTCTATAGCGATGTTCTTGAGCAGCACAAACAAAAAATCACTTGTGGCAACAAACAATTCTCCCCATCCCACCTCTTCAATTTCGCCAAAAAACAAATGGATTACATACTGGGTAAGAACCCAGAAGGAAGATCAATTATGGTAGGGTTTGGGAAGAACCCACCACAGCAAGCTCACCATAGAGGGGCATCGGTACCGATGACAGCAGAAAAGGAAGAGGTAAGTTGTGGCACGAGCTTCACCAAATGGTTACAACACGATGGACCAAACCCTAACGAGCTTACTGGTGCCATCTTGGGAGGACCTGACAGCAACGACCATTTCGATGACAAACGTACCGATTCTGCCATGACCGAACCTTGCACCTACGTTAACTCTCTCGCCGTCGGTCCTCTTGCAAAGCTTGCATCTTTGTATCACTAA 1455 0.4268 MGIQRASLAIILTWLAVFERCLYHVNGELDYKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLSGGYYDAGDNVKYGLPMAFTVTSLSWAAIYYKNELENAKEMDNVRDAIKWGTDFFLKAASRRGRLYVQVGDPEEDHHCWVRPENMKTKRTVLQIDSNTPGSEIAAETAAAMASSSIVFRKIDRRYSRRLLNKAKLLFKLAKSHKGTYDGECPFYCSFSGYNDEMLWAATWLYIATRKSMYLKYVQEESISAYVNEFSWDLKYAGAQMLLTKLHYEGEKNLETFKYQADSFICSVLPDSPYSQIKLTPGGAIHLRDGANTQYVTGTAMLFTFYSDVLEQHKQKITCGNKQFSPSHLFNFAKKQMDYILGKNPEGRSIMVGFGKNPPQQAHHRGASVPMTAEKEEVSCGTSFTKWLQHDGPNPNELTGAILGGPDSNDHFDDKRTDSAMTEPCTYVNSLAVGPLAKLASLYH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0451 484 MobiDBLite consensus disorder prediction 431 457 - -
Dere04g0451 484 SUPERFAMILY Six-hairpin glycosidases 30 483 IPR008928 GO:0005975
Dere04g0451 484 Pfam Glycosyl hydrolase family 9 31 474 IPR001701 GO:0004553|GO:0005975
Dere04g0451 484 Gene3D - 26 484 IPR012341 GO:0005975
Dere04g0451 484 PANTHER ENDO-1,4-BETA-GLUCANASE 10 481 - -
Dere04g0451 484 FunFam Endoglucanase 27 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0451 Dere-ChrDere04 4554548 4556719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0451 25 481 Glycoside Hydrolase AT3G43860 71.834 0.0 689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0451 04 4554548 4556719 Dere04g0451 04 4554548 4556719 ECH