Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0442 ATGATAACCTTATCACCAGAGTTGGTTGATCAGTCGAGTGAAGAGGAGCAAATAGAAGCTGCCACACTGGAAATGGCTTCCGCATCATTGGCTTTTCCTCTTACTTGTGCTACCCAAAACAGAGTACGCCAGCCATCCCCTGATGCCTTCCTCAACCCATTACCTCTTAAGAGGACTGTGCTTTCAAAGCCAAAATCAAAATCCAAGTTCGGAATTGAAGCATCGTTGAAGGAGAAGGCAGTGAGAGGCCTTACGGCGGCTACCTTGACAGCTTCCATGGTGATACCGGAGGTGGCTCAGGCTGCTGGATCTGACCTCACCCCATCTCTCAAGAACTTCTTGCTCAGCATATTCGCCGGCGGAGTTGTGCTAGCAGCCATTTTTGGAGCCGTTATCGGGGTTTCCAACTTTGACCCCGTTAAGAGAACTTGA 432 0.4954 MITLSPELVDQSSEEEQIEAATLEMASASLAFPLTCATQNRVRQPSPDAFLNPLPLKRTVLSKPKSKSKFGIEASLKEKAVRGLTAATLTASMVIPEVAQAAGSDLTPSLKNFLLSIFAGGVVLAAIFGAVIGVSNFDPVKRT 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0442 143 PANTHER OS07G0673550 PROTEIN 25 143 - -
Dere04g0442 143 Pfam Photosystem II reaction centre X protein (PsbX) 107 142 IPR009518 GO:0009523|GO:0015979|GO:0016020
Dere04g0442 143 Gene3D Single helix bin 105 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0442 Dere-ChrDere04 4441804 4442378 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0442 04 4441804 4442378 Dere04g0442 04 4441804 4442378 ECH