Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0386 ATGGATCACTTTCCATTTGCGATCATCGTCTTCCTCATCGTAACCCTCTCCGGTGCGGTAGCTGGTGGCCGAGACCTCGATGGGGGGATTATCCGATTGCCCTCGGAAGTTACGAGGTTCTTCCACGGAGATCGTACAAAGGAGAACAACCAAAACATAAAGGCCGAGGGGACGAGGTGGGCAGTTTTGATCGCTGGTTCCAGTGGGTACTGGAATTACAGGCACCAGTCTGATGTTTGTCATGCGTATCAACTATTGAGGAAAGGTGGACTGAAGGAAGAAAATATTGTTGTTTTTATGTATGACGACATTGCTTTCAATGAAGAGAATCCAAGGCCTGGAATTATCATCAACAGCCCAGATGGGGATGATGTTTATCAAGGAGTCCCAAAGGATTACACTGGCGAAGATGTTACTGTTGACAATTTTTTTGCTGTTATACTTGGAAATAAGACAGCTCTTACTGGTGGCAGCGGGAAGGTTGTGGATAGTGGCCCCAATGATCATATATTTATATACTACACTGATCATGGTGGTCCAGGAGTGCTTGGGATGCCGACTACTCCTTACTTATATGCAAATGATCTGATTGAAGTTTTGAAAAAGAAGCATGCTTCTGGAACATATAAGAGCCTAGTATTTTATCTTGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGGTTTAAATATTTATGCTACAACAGCTTCAAATGCAGATGAAAGCAGTTGGGGTACATATTGCCCTGGGGAGTATCCCAGTCCTCCTCCAGAATATGAAACTTGCTTAGGTGACCTCTACAGTGTTGCCTGGATGGAAGACAGTGACATACACAATTTGCGAACAGAAACATTGCATCAACAGTATGAACTGGTTAAAAGGAGGACTGTTAGTGGTAATTCGGTCTATGGCTCTCATGTGATGCAATATGGTGATATAGGGATTAGCAAGAATGATCTCTTCAGATATTTTGGAACAAATCCTGCTAATGATAATTACACTTTTGTGGATGAGAACTCCCTGAGGCCACCTACAAAAGCGGTCAACCAACGTGATGCTGATCTCATCCATTTTTGGGATAAGTATCGCAAAGCTCCTGAGGGTTCTCCTAGGAAAGTTAAAGCTCAGAAACAAGTTTTGGAAGCCATGTCTCACAGAATCCATTTAGACAACAGCGTGAAACTTATTGGAAAGCTGTTATTTGGCATTGAAAAGGGTCCAGAAGTGCTCAATGCTGTTCGCTATGCTGGGCAACCACTTGTTGATGACTGGGACTGCTTGAAAATGATGGTCAGGACTTTTGAGACATATTGTGGATCCCTGTCCCAGTATGGGATGAAACACATGAGGTCCTTTGCAAACATCTGCAACGCAGGAATACGGAATGAGCAAATGGCGGAGGCCTCAGCCCAAGCATGCGTCAGTGTTCCTGCCAGTCCCTGGAGTTCTCTGCACAGGGGTTTCAGTGCATAA 1485 0.4431 MDHFPFAIIVFLIVTLSGAVAGGRDLDGGIIRLPSEVTRFFHGDRTKENNQNIKAEGTRWAVLIAGSSGYWNYRHQSDVCHAYQLLRKGGLKEENIVVFMYDDIAFNEENPRPGIIINSPDGDDVYQGVPKDYTGEDVTVDNFFAVILGNKTALTGGSGKVVDSGPNDHIFIYYTDHGGPGVLGMPTTPYLYANDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNADESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYELVKRRTVSGNSVYGSHVMQYGDIGISKNDLFRYFGTNPANDNYTFVDENSLRPPTKAVNQRDADLIHFWDKYRKAPEGSPRKVKAQKQVLEAMSHRIHLDNSVKLIGKLLFGIEKGPEVLNAVRYAGQPLVDDWDCLKMMVRTFETYCGSLSQYGMKHMRSFANICNAGIRNEQMAEASAQACVSVPASPWSSLHRGFSA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0386 494 Gene3D - 57 353 - -
Dere04g0386 494 Gene3D - 354 482 IPR046427 -
Dere04g0386 494 FunFam Vacuolar-processing enzyme beta-isozyme 57 353 - -
Dere04g0386 494 PIRSF AE 3 494 IPR043577 GO:0004197|GO:0051603
Dere04g0386 494 FunFam Vacuolar-processing enzyme beta-isozyme 354 482 - -
Dere04g0386 494 PIRSF Legumain 5 494 IPR001096 GO:0006508|GO:0008233
Dere04g0386 494 PANTHER HEMOGLOBINASE FAMILY MEMBER 46 478 IPR001096 GO:0006508|GO:0008233
Dere04g0386 494 PRINTS Hemoglobinase (C13) cysteine protease signature 60 84 IPR001096 GO:0006508|GO:0008233
Dere04g0386 494 PRINTS Hemoglobinase (C13) cysteine protease signature 85 114 IPR001096 GO:0006508|GO:0008233
Dere04g0386 494 PRINTS Hemoglobinase (C13) cysteine protease signature 132 147 IPR001096 GO:0006508|GO:0008233
Dere04g0386 494 PRINTS Hemoglobinase (C13) cysteine protease signature 160 179 IPR001096 GO:0006508|GO:0008233
Dere04g0386 494 PRINTS Hemoglobinase (C13) cysteine protease signature 209 225 IPR001096 GO:0006508|GO:0008233
Dere04g0386 494 CDD legumain_C 356 477 - -
Dere04g0386 494 Pfam Peptidase C13 family 59 329 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0386 Dere-ChrDere04 4002306 4006690 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0386 04 4002306 4006690 Dere04g0386 04 4002306 4006690 ECH