Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0376 ATGAAACGTTATGATGATTCCATGGTTTTAAATCCCCCTTTCTCCTTTTTTTATATCGTTAGCACCACCATGATTCACAGGACTCTCTACTTCCCAACTATAGCTCGATTGCTTCTTCGACTTGCTCCTCCTTCTTCCCCTACTTCCAAGGCAGGAGATAAATGCCGTGGCTTTGCGTCTCAAGTCTCCACTCTTCAAGTGCCCCAACCATTATCACCTTACAGCGAGGATGTGGATGTTGACGTCCAATGGGATAGGCTTGGATTTGGATTAATGCCAACTGATCACATGTACATGGCCAAGTGTAGTGGGGACCAGAAATTTGGACAAGGACAACTAAGTCTTTTTGGGGACATTCAAATGAGCCCGTCCGCTGGAGTTCTCAATTACGGACAAGGACTGTTCGAAGGAACAAAGGCGTACAGAAAAGAAAACGGTCACCTGCTTCTCTTCCGTCCAGAACAAAATGCCATCCGCATGCAGATTGGTGCAGAAAGAATGTGCATGCCATCACCTTCCGTGGACCAATTTGTCGATGCTCTGAAGCAAACTGCCTTGGCTAATAGGCACTGGGTTCCTCCACTGGAGAAGGGATCGTTGTACCTTAGGCCTCTGCTCATAGGAACGGGTCCTGTATTGGGTTTGGCTCCGGCACCAGAGTATACATTCCTCATATATGCTTCCCCTGTTGGCAACTATTTCAAAGAGGGTACAGCACCGCTTAACATGTACGTGGAAGAGGATTTTGATCGCGCTTCTCGTCGAGGAACTGGAAACGTTAAAACCATTTCAAACTATGCCCCGGTCTTGAAGGCACAAACGAGAGCTAAGAACAAAGGATTTTCAGATGTGCTGTACCTCGACTCGATCACGAAGAGAAATCTAGAGGAGGTTTCTTCTTGTAACATTTTTATAGCCAAGGGTAAACACATCTCCACACCTGCTACCAATGGAACCATTCTTGCTGGCATTACTAGAAAAAGTGTGATTGAAATTGCTCATGATCATGGCTACCAGGTGGAAGAGCGTGTTGTTGCAGTGGATGAATTAGCTGAGGCTGATGAAGTTTTTTGCACTGGAACTGCTGTTGGTGTTGCCCCGGTGGGGAGCATCACATACCAGGGTAAAAGGATGAAATATAAAACAGGTAGTGGAACTATTTGTCAAGAGCTGTGCTCTACTCTCACGGGAATTCAGACAGGTGAAATTGAAGATAAGAAAGGGTGGGTCCTTGAGATTTACTGA 1245 0.4594 MKRYDDSMVLNPPFSFFYIVSTTMIHRTLYFPTIARLLLRLAPPSSPTSKAGDKCRGFASQVSTLQVPQPLSPYSEDVDVDVQWDRLGFGLMPTDHMYMAKCSGDQKFGQGQLSLFGDIQMSPSAGVLNYGQGLFEGTKAYRKENGHLLLFRPEQNAIRMQIGAERMCMPSPSVDQFVDALKQTALANRHWVPPLEKGSLYLRPLLIGTGPVLGLAPAPEYTFLIYASPVGNYFKEGTAPLNMYVEEDFDRASRRGTGNVKTISNYAPVLKAQTRAKNKGFSDVLYLDSITKRNLEEVSSCNIFIAKGKHISTPATNGTILAGITRKSVIEIAHDHGYQVEERVVAVDELAEADEVFCTGTAVGVAPVGSITYQGKRMKYKTGSGTICQELCSTLTGIQTGEIEDKKGWVLEIY 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0376 414 CDD BCAT_beta_family 120 401 IPR033939 GO:0004084|GO:0009081
Dere04g0376 414 PANTHER AMINO ACID AMINOTRANSFERASE 71 413 IPR005786 GO:0004084|GO:0009081
Dere04g0376 414 Gene3D - 60 243 IPR043131 -
Dere04g0376 414 Gene3D - 244 414 IPR043132 -
Dere04g0376 414 FunFam Branched-chain-amino-acid aminotransferase 65 240 - -
Dere04g0376 414 NCBIfam branched-chain-amino-acid transaminase 110 413 IPR005786 GO:0004084|GO:0009081
Dere04g0376 414 ProSitePatterns Aminotransferases class-IV signature. 297 326 IPR018300 GO:0003824
Dere04g0376 414 Pfam Amino-transferase class IV 133 371 IPR001544 GO:0003824
Dere04g0376 414 PIRSF BCAT1 62 414 IPR005786 GO:0004084|GO:0009081
Dere04g0376 414 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 77 410 IPR036038 GO:0003824
Dere04g0376 414 FunFam Branched-chain-amino-acid aminotransferase 242 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0376 Dere-ChrDere04 3846221 3857991 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0376 04 3846221 3857991 Dere04g0376 04 3846221 3857991 ECH