Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0357 ATGTCATGGCTGGCTCGCTCTCTGGCAAACTCCCTCCGACTCGACGACGATGACGCCGACGCTGACGATAGTGAAGAATGCGACGTCGTACCCAATCATCCGCATGACCCTCCCTCTACTTCACCTAGAGATCATGAACCCCATCACCTGCAACATCATCATCAACCACAACAGCAACAACCGCAAGACAATGAGCTCGGATCAGAAGATGACGCGCGTGCTCGAGGAGTCCAAGAGGACCTTAACGTATTCCAGCAGACCCTAACCCGTCAATTCTGGGGAATGGCATCTTTCCTAGCTCCTCCGCCCTCAACAGATTCCCACCCTTCCTTTCCCTCTCATCGCCACACCCAATCTGATCCCATCGCATCCACTTGTAATCGGTCAGAGTCGTCTGATCACTCTTTTTCTCAAAAAGCTGAAGATTCAGAAGCGCAAGGGATTCGGAGAGACTTTTCCAACATCGAAGAAGTAAGTTTCGAGAGGGACGCCCCTGAAACTTCCGGTACAAACCTGAATTTGATTTCGTTTGGATCCGAGTCTATAGGAAACGAGGAATCGGAAATGGAGGAGTATGATTTTGAACGCGCGATTGGAGTTACAGATGAGGTGTTGGCCTTTGCGAGAAATATCGCGATGCATCCCGAGACGTGGCTGGATTTCCCTATGGACGAAGAAGAAGACACGGATGATTTTGACATGTCCGATGCCCAACAGAAGCATGCTTTGGCCATTGAAAGACTTGCTCCTAGATTAGCTGCGCTCAGAATTGAGCTGTGTCCTTGCCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACATGATGCTGGGGTTTTGTCTACACCTCAGGTTATGGCAGCCAGAGCAATGTGGATGCAAGAGTTACAGAAGCTAGCAAAGCTTCGATCTGGAAGTTTTGGAGGGAACATTTCCTACTTAAGAGACACAACTCAGCATGAGGATTTTTCTCCCATGTTATTCGATGATGCCTATTCTGGTGATTTGCCTCATGGAACATACAGATTTGAGTCGACCACTTTGTCGATGAAGGAAGATTATGAGACTGAGAATCACACTGTTGACAGTTCTGCAGCACCTTTCATCGATAATACAGTTAATAAGGAAAACCTAAAATTTAAAACCGAGGACAGGGACCTAATAAGTGGTCGATCCTCTAAATTTATTCTAGAGGACTATGAAGATGATGATGATGAATGGCCAGAGGACAGTTGTGATGGAATCACCATGCCCGTGGTAAATGAAGAAGACATATCTTTTAGTGATCTTGAGGATGATAATTATGTAGTGACCCCTGTTAAATCCAATAAAGAATCAAAAGCTCTGTGA 1377 0.4553 MSWLARSLANSLRLDDDDADADDSEECDVVPNHPHDPPSTSPRDHEPHHLQHHHQPQQQQPQDNELGSEDDARARGVQEDLNVFQQTLTRQFWGMASFLAPPPSTDSHPSFPSHRHTQSDPIASTCNRSESSDHSFSQKAEDSEAQGIRRDFSNIEEVSFERDAPETSGTNLNLISFGSESIGNEESEMEEYDFERAIGVTDEVLAFARNIAMHPETWLDFPMDEEEDTDDFDMSDAQQKHALAIERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKHDAGVLSTPQVMAARAMWMQELQKLAKLRSGSFGGNISYLRDTTQHEDFSPMLFDDAYSGDLPHGTYRFESTTLSMKEDYETENHTVDSSAAPFIDNTVNKENLKFKTEDRDLISGRSSKFILEDYEDDDDEWPEDSCDGITMPVVNEEDISFSDLEDDNYVVTPVKSNKESKAL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0357 458 ProSiteProfiles BSD domain profile. 226 281 IPR005607 -
Dere04g0357 458 MobiDBLite consensus disorder prediction 26 53 - -
Dere04g0357 458 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 444 - -
Dere04g0357 458 SMART wurzfinal6 229 281 IPR005607 -
Dere04g0357 458 Pfam BSD domain 229 285 IPR005607 -
Dere04g0357 458 MobiDBLite consensus disorder prediction 109 133 - -
Dere04g0357 458 MobiDBLite consensus disorder prediction 1 71 - -
Dere04g0357 458 MobiDBLite consensus disorder prediction 99 175 - -
Dere04g0357 458 SUPERFAMILY BSD domain-like 199 285 IPR035925 -
Dere04g0357 458 MobiDBLite consensus disorder prediction 134 163 - -
Dere04g0357 458 Gene3D BSD domain 197 288 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0357 Dere-ChrDere04 3653253 3656689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0357 197 279 EF-hand Containing Proteins AT1G69030 30.108 2.97e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0357 04 3653253 3656689 Dere04g0357 04 3653253 3656689 ECH