Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0335 ATGGGAAAGCGTAATTCTCAGCGCAAAAATGCCGCTATGATGGATAGCGATGATGAGAGTAGTGTCAGTTCGTCGTCGACTGTCCGGTCTGATCTCATGTCAGTGTCGGGTGCTGAAGAAGTACATGTTGATCAAGATACTTTGCTTGACAAAGCTCTCGATGCTTTAGATGAAAAGAGGGGTACCACAAGGGAGAAAGCATTGTCGTTGATCATTGAATCATTCAATAGCAATATGCAGCATCAGTTCGTGGAGAAGAAATTTGCTACCTTATTGCATCAGTGTCTTGGTGCCCTTAAAAAAGGATCCAAAAAGGCATCTGCAAAGGAAATAGCATTGGCATCTCATGCCATTGGTTTGTTGGCCTTGACTGTTGGATGCAGTGATAATGCACGTGAAATATTTGAAGAGTCTGTCCGTCCTCTTGATGAATCTCTGACATCTGGTTCAGATGCCTCAAAGATATCATCTTTGGTGCAGTGCTTGGCTATCATCACTTTTATTGGTGGGACTGATCAAGAGGAAACAGAGAAATCAATGGACATAATGTGGCGATTGATTCATCCTAAATTGGGTTCCAATGTAGTTGCATTCAAACCTTCACCTTTGTTAATTACGGCTGTGGTGTCTGCTTGGTCCTTTCTCCTCTCCAGCATGGGCAACCTGAAGCTAAACTCCAAAAACTGGCAAAATTCAATATCTTATTTATCTAGTCTTCTAGACAAGGAAGACCGGTCCATACGTATTGTAGCTGGCGAAGCATTAGCTTTAATATTTGAGGTTGGAATTATTGAGAAATCTTCTGCTGCTCCTAATGTTGCAAGTGACATTACTCGAGAAGAGAGTAAGCAGCAGGAAAGTTTTGTGCATATCCAAGGATTGAAAGGGAAGATCATAAATCAAGTTAAAAACCTTGCTGTGGAGGCTGGTGGAAAAGGTTCTGCTAAAAAAGATCTCAACACTCAGAGGGACTTGTTTCGAGATATCTTGGAATTTTTTGATTATGGTTACACTCCTGAAATTACGACAAAGATTGGTGGTGATTCACTGCAGATATCATCATGGTCCCAAATGATACAGTTGAACTTTTTCAAGCACTTCTTGGGGGGAGGGTTCATTAGACACATGCAGGAAAATGAGTTCCTTCATGATGTCTTTGACTTCACACCAAAGAGAAGGAACCTTGCTGACAATGAACATCGGATGTCTGTTGGTGAAAAGAGATTGTTTAAGTCTCCGAATTCAGTTTTGAACAAGGCAAGGACCCAATTACTTAACAAGCAGCGGTTGTTATCTGAGGGCAGAAACTTCGGCCACTACGCTGTCAATATGGTTGATGAGGAGGCGTGA 1350 0.4185 MGKRNSQRKNAAMMDSDDESSVSSSSTVRSDLMSVSGAEEVHVDQDTLLDKALDALDEKRGTTREKALSLIIESFNSNMQHQFVEKKFATLLHQCLGALKKGSKKASAKEIALASHAIGLLALTVGCSDNAREIFEESVRPLDESLTSGSDASKISSLVQCLAIITFIGGTDQEETEKSMDIMWRLIHPKLGSNVVAFKPSPLLITAVVSAWSFLLSSMGNLKLNSKNWQNSISYLSSLLDKEDRSIRIVAGEALALIFEVGIIEKSSAAPNVASDITREESKQQESFVHIQGLKGKIINQVKNLAVEAGGKGSAKKDLNTQRDLFRDILEFFDYGYTPEITTKIGGDSLQISSWSQMIQLNFFKHFLGGGFIRHMQENEFLHDVFDFTPKRRNLADNEHRMSVGEKRLFKSPNSVLNKARTQLLNKQRLLSEGRNFGHYAVNMVDEEA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0335 449 Gene3D - 30 279 IPR011989 -
Dere04g0335 449 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 7 442 IPR039777 -
Dere04g0335 449 MobiDBLite consensus disorder prediction 16 30 - -
Dere04g0335 449 Pfam Interferon-related protein conserved region 379 429 IPR006921 -
Dere04g0335 449 MobiDBLite consensus disorder prediction 1 30 - -
Dere04g0335 449 Pfam Interferon-related developmental regulator (IFRD) 23 332 IPR007701 -
Dere04g0335 449 SUPERFAMILY ARM repeat 44 260 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0335 Dere-ChrDere04 3330251 3334095 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1701 05 26731034 26734872 Dere04g0335 04 3330251 3334095 CCT