Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0198 ATGAAACCTCAAACTCCAATTATAAGCCAACTCATAAATCTCTGGCCTCGCAATTCAAACTTGACCCCCAACTCCCTCACACACCCTCTCCCCTTCCCCAAAAGCTCACATACTATGCCTTTGCCAAAACCCAATCCACCATTCCTCTTCTTTCTTATTCTCACCCTCTTCTTCCTCCCCTGTTTATCCGCCTCCAAAAATGCCACAGACGACACTGCTTCTGTCACTAATTTCACTCGACAGTTCAAAGAAGCCCCCCAATTCTACAACTCCCCCGATTGCAAATCCATCGCCGACGACCACTATATCTGCTCCGATGAAGTCGTCCATATCGCAATGACGCTCGACACCACTTACATTCGTGGCTCCATGGCTGCCATCCTCTCCGTCCTCCAACACTCGTCCTGCCCCCAGAACGTCTTCTTCCACTTCGTCTGTTCCTCCAACCCCTCCCTTCTCCGTTCCGCCATTTCCAAATCATTCCCTTACCTCCAATTTCAGCTCTACATCTTCGATGATTCCACCGTCTCTGGCCTCATCTCCACCTCCATTCGCTCCGCCCTCGATTGCCCTCTCAACTACGCTCGCAGTTACTTGGCCAACCTTCTTCCTTTATGTGTTCGCAGAGCGGTCTACCTGGACTCCGACCTCCTTCTTGTGGATGACATTGCCAAACTCGCAGCCATCCCACTGGGGGAAAGTTCAGTGCTAGCAGCACCTGAATACTGCAACGCCAATTTCACCTCCTATTTTACTCCCACATTTTGGTCTAATCCCTCTCTGTCGCTCACCTTCGCTGACAGAAAGGCTTGCTATTTCAATACTGGGGTGATGGTGATTGATCTAGAGCGGTGGCGAGCAGGGGATTACACCAAGAAGATTGAGGAATGGATGGAGTTGCAGAAGAGGATGAGAATCTATGAGCTGGGTTCGTTGCCTCCGTTTCTGCTTGTCTTTGCCGGTAAGATAGCTCCGGTGGATCACCGGTGGAACCAACATGGTCTCGGTGGAGACAATTGGCGCGGGCTCTGTAGGGATCTGCACCCTGGCCCGGTGAGTCTCTTGCATTGGAGTGGGAAAGGTAAGCCATGGGCTCGATTGGACGCTAATAGGCCTTGTCCTCTGGATGCACTCTGGGCACCCTACGATCTACTCCAGACTCCATTTGCTTTGGATTCTTGA 1182 0.5144 MKPQTPIISQLINLWPRNSNLTPNSLTHPLPFPKSSHTMPLPKPNPPFLFFLILTLFFLPCLSASKNATDDTASVTNFTRQFKEAPQFYNSPDCKSIADDHYICSDEVVHIAMTLDTTYIRGSMAAILSVLQHSSCPQNVFFHFVCSSNPSLLRSAISKSFPYLQFQLYIFDDSTVSGLISTSIRSALDCPLNYARSYLANLLPLCVRRAVYLDSDLLLVDDIAKLAAIPLGESSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFADRKACYFNTGVMVIDLERWRAGDYTKKIEEWMELQKRMRIYELGSLPPFLLVFAGKIAPVDHRWNQHGLGGDNWRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLQTPFALDS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0198 393 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 51 386 - -
Dere04g0198 393 Pfam Glycosyl transferase family 8 110 366 IPR002495 GO:0016757
Dere04g0198 393 FunFam Hexosyltransferase 110 373 - -
Dere04g0198 393 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 110 372 IPR029044 -
Dere04g0198 393 SUPERFAMILY Nucleotide-diphospho-sugar transferases 109 384 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0198 Dere-ChrDere04 2010411 2011592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0198 74 393 Glycosyltransferase AT1G19300 77.039 1.06e-177 496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0198 04 2010411 2011592 Dere04g0198 04 2010411 2011592 ECH