Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0152 ATGAACATAGTGATCAAGGACAGCGACAGTGGAGGTTCTGGTTTCTACACTTCTTATGCTGTTCACCAGGACCATCCTCCGTTACTTGGACAGAGCTACCCCTCTCCTAATACTAAACTACAATGTCCAGGGTGTATTTTTCTGGCATTTCCAGTATTTTTCGTCATTGATCGCAGTGAGAGAGAGATTATGGCATCAGATACACTCACCCACCGTATAAATAACGACAGGTTCTTTGTTTGCTCAAGTTTAAAAGCCAGCGAGGGCAGAGTGATGAACATGGCGCGTCGCTTCTTTCTGGTTTTCTTGGTTTTGTTTGCGGTATCAGAACAGAGGACCTTAGTCCAAGTCGAAGCAGATGATGGGTTTGTGAAAACAAGAGGTGTGCAATTGTTGTTAAATGGGAGCCCCTATTATGCTAATGGGTTCAATGCCTACTGGCTTATGTACGTGGCCTCTGATCCATCTCAGAGGAACAAGGTCTCATCTGCGTTTCAAGAGGCTACCAGTCATGGACTTAATATAGCTAGGACTTGGGCTTTCAGTGATGGAGGATATAAACCACTCCAATACTCTCCTGGATCCTACAATGAGGATATGTTCCAGGGGTTAGACTTCGTAATATCTGAAGCCAGAAGATATAGGATCAAGCTGGTTTTGAGTTTGGTGAATAACTACGATAACTTAGGAGGAAAGAAGCAGTATGTTGACTGGGCAAGGAGTCAGGGCCAGTCCATTAATTCTGAAGATGATTTTTTCTCCAACCCTGCAGTGAAGGGATACTACAAAAATCACATCAAGACCGTACTTACAAGACGTAACAGCATCACCGGAGTTGCTTATAAAGACGACCCAACTATAATGGCGTGGGAGCTCATGAACGAGATAAGGTGCCCTTCAGATCAATCAGGAAAAGTCGTACAGGATTGGATTACTGAGATGGCATCTTACTTAAAATCCATTGATGGAAACCACTTGCTTGAAGCTGGTCTGGAGGGTTTCTATGGTCAATCAAAGCAGGAATCTAATCCCAACTTCCAAGTAGGAACAGATTTCATTGCAAACAACCAGATACCTGGCATTGATTTTGCTACAATTCACTCCTACCCTGATCAATGGCTATCAGGTTCAGGTTATGAAGACCAACTCTCCTTTTTGAGTGGGTGGCTCAAGGAGCACATCCAAGATGCACAGAACACTCTTCACAAGCCACTTTTGTTTGCAGAGTTTGGGATATCAACAAAGAACTTCGGATCAAACTCAAAGCCAAGGGACCAGCTTTTCAACAACGTGTATTCTGCAATCTATTCATCAGCAAGTGGTGGTGGGGCTGCTGTTGGTGGCTTATTTTGGCAACTTCTAGCTGAAGGAATGGACTCTTTTCGAGATGGGTACGAGGTAGTCTTAGGTGAGAGTCCCTCAACAGCCAGTTTGATAGCTCAAGAGTCTCAAAAGTTAAACCGAATTCGAAAGATGTATGCCAGACTCAAAAACATTGAGGAATGGAATAAAGCAAGAGATATTAGAAGCGTTAATGGCGGAAATTGA 1548 0.4354 MNIVIKDSDSGGSGFYTSYAVHQDHPPLLGQSYPSPNTKLQCPGCIFLAFPVFFVIDRSEREIMASDTLTHRINNDRFFVCSSLKASEGRVMNMARRFFLVFLVLFAVSEQRTLVQVEADDGFVKTRGVQLLLNGSPYYANGFNAYWLMYVASDPSQRNKVSSAFQEATSHGLNIARTWAFSDGGYKPLQYSPGSYNEDMFQGLDFVISEARRYRIKLVLSLVNNYDNLGGKKQYVDWARSQGQSINSEDDFFSNPAVKGYYKNHIKTVLTRRNSITGVAYKDDPTIMAWELMNEIRCPSDQSGKVVQDWITEMASYLKSIDGNHLLEAGLEGFYGQSKQESNPNFQVGTDFIANNQIPGIDFATIHSYPDQWLSGSGYEDQLSFLSGWLKEHIQDAQNTLHKPLLFAEFGISTKNFGSNSKPRDQLFNNVYSAIYSSASGGGAAVGGLFWQLLAEGMDSFRDGYEVVLGESPSTASLIAQESQKLNRIRKMYARLKNIEEWNKARDIRSVNGGN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0152 515 Coils Coil 479 499 - -
Dere04g0152 515 PANTHER - 96 508 IPR045053 GO:0004553
Dere04g0152 515 SUPERFAMILY (Trans)glycosidases 123 476 IPR017853 -
Dere04g0152 515 Pfam Cellulase (glycosyl hydrolase family 5) 156 424 IPR001547 GO:0004553|GO:0071704
Dere04g0152 515 FunFam Mannan endo-1,4-beta-mannosidase 6 120 490 - -
Dere04g0152 515 Gene3D Glycosidases 119 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0152 Dere-ChrDere04 1598516 1600870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0152 99 506 Glycoside Hydrolase AT5G66460 62.892 0.0 543
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0152 04 1598516 1600870 Dere04g0152 04 1598516 1600870 ECH