Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0133 ATGAGAGTCACTTCCATTTTGATCACTCTGTTTCTGCTTTTCACTCTTTTCACTCTCTCCTCTTCTGCCAACACCTCTGAACTGTTTGAAAGCTGGTGCAAGCAACATGGCAAAAACTACTCTCCCGAAGAGGAGAAACTCTACAGGTTCAGAGTATTCGAGGACAACTACGCCTTTGTTTCCAAACACAATGAACTGGGCAATTCCAGTTATACTCTCTCCCTCAATGCCTTCGCCGATTTGACCAACCATGAATTCAAGGTCTCTCGTTTAGGTTTATCCCCTGCCTTGCTTCGATTCGACCATCAAACGCTTCAGCAACCCGATGACCTCCTGCTCGATCTTCCTTCTGAGTATGACTGGAGAAAGAAAGGGGCGGTTACTCAGGTTAAAGACCAAGGAAACTGTGGTGCTTGTTGGTCTTTCTCAGCAACAGGAGCTATTGAAGGTATAAATAAGATTGTGACAGGTTCTCTTGTTAGCCTCTCTGAACAAGAATTGGTAGATTGTGATAGAACCTTCAACAGCGGCTGTGAGGGTGGACTCATGGATTATGCTTATCAATTTGTCATTGATAACCATGGGATTGACACTGAGGAAGATTACCCATACCAAGGTCGTGATAGGTCTTGCATTAAAGATAAGTTAAAAAGGCGTGTTGTTACAATTGATGGTTACACTGACGTTCCGCCAAATAATGAGAAGCAGCTACTAAAGGCTGTTGCAACTCAGCCTGTAAGTGTTGGCATATGTGGGAGTGATAGAGCTTTCCAGTTATACTCAAAGGGTATTTTCACTGGCCCCTGTTCAACTTCTTTGGATCATGCGGTGTTGATTGTAGGATATGGTTCAGAAAATGGAGTAGATTATTGGATTGTGAAGAACTCGTGGGGAACTAGTTGGGGAATGAATGGTTACATACACATCCATCGAAACAACGGCAACTCCCAAGGGATATGTGGAATCAACATGTTAGCATCATATCCAACCAAGACCAGCCCTAATCCTCCTTCCCCATCTCCCCCAACTCCTACTAGATGTAATCTCTTCACTTATTGTTCACAAGGGGAAACCTGCTGCTGTGCGAGGCACTTTTTTGGATTATGCATTTCATGGAAATGTTGTGGCTTAACATCTGCTGTCTGCTGCAAGGACAATCGCCACTGCTGCCCTCAAGATTATCCGGTTTGTGACATAACTAGGGGCCAATGTCTTAAGAGGACTGCAAATGTGACGAGAACAAAAGCACGTGAGGTTGAGAGCTCTTTCTATAAGCCAAAGGGTTGGAAATCTCAGTGA 1299 0.4419 MRVTSILITLFLLFTLFTLSSSANTSELFESWCKQHGKNYSPEEEKLYRFRVFEDNYAFVSKHNELGNSSYTLSLNAFADLTNHEFKVSRLGLSPALLRFDHQTLQQPDDLLLDLPSEYDWRKKGAVTQVKDQGNCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDRTFNSGCEGGLMDYAYQFVIDNHGIDTEEDYPYQGRDRSCIKDKLKRRVVTIDGYTDVPPNNEKQLLKAVATQPVSVGICGSDRAFQLYSKGIFTGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGTSWGMNGYIHIHRNNGNSQGICGINMLASYPTKTSPNPPSPSPPTPTRCNLFTYCSQGETCCCARHFFGLCISWKCCGLTSAVCCKDNRHCCPQDYPVCDITRGQCLKRTANVTRTKAREVESSFYKPKGWKSQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0133 432 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 24 328 IPR013128 GO:0008234
Dere04g0133 432 Pfam Granulin 358 405 IPR000118 -
Dere04g0133 432 CDD Peptidase_C1A 116 329 IPR039417 -
Dere04g0133 432 PRINTS Papain cysteine protease (C1) family signature 275 285 IPR000668 GO:0006508|GO:0008234
Dere04g0133 432 PRINTS Papain cysteine protease (C1) family signature 133 148 IPR000668 GO:0006508|GO:0008234
Dere04g0133 432 PRINTS Papain cysteine protease (C1) family signature 290 296 IPR000668 GO:0006508|GO:0008234
Dere04g0133 432 SMART pept_c1 115 330 IPR000668 GO:0006508|GO:0008234
Dere04g0133 432 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 290 309 IPR025661 -
Dere04g0133 432 Gene3D Granulin 345 418 IPR037277 -
Dere04g0133 432 SMART Inhibitor_I29_2 29 86 IPR013201 -
Dere04g0133 432 FunFam Cysteine protease 1 344 407 - -
Dere04g0133 432 Pfam Cathepsin propeptide inhibitor domain (I29) 29 86 IPR013201 -
Dere04g0133 432 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 273 283 IPR025660 -
Dere04g0133 432 FunFam cysteine protease XCP2 11 332 - -
Dere04g0133 432 SUPERFAMILY Cysteine proteinases 23 330 IPR038765 -
Dere04g0133 432 Gene3D Cysteine proteinases 12 332 - -
Dere04g0133 432 SUPERFAMILY Granulin repeat 344 377 - -
Dere04g0133 432 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 133 144 IPR000169 -
Dere04g0133 432 SMART GRAN_2 347 404 IPR000118 -
Dere04g0133 432 Pfam Papain family cysteine protease 115 329 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0133 Dere-ChrDere04 1404842 1407594 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0133 04 1404842 1407594 Dere04g0133 04 1404842 1407594 ECH