Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0046 ATGGACAAATTCACAGGGTTGAGTCACCTCTTCATGACAGTGTTCCTGCACAATTTCTCGTCTTTCATGGTGGTTCCCGCCATCACCGACGTCACCATGGCTGCCCTTTGTCCCGGCCAAGACGAGTGCTCCCTCGCCATTTACCTCACTGCTTTTCACCAAGCGATCACAGGACTGGGAACGCTTGTGACGATGCCTCTGCTGGGTAATTTCTCTGATATGTATGGGAGGAAGGCTGTTCTCACACTCCCAATGACCCTCGCAATAATTCCCCTAGGTATATTAGCTTATAGCCGGACACAGAAGTTCTTCTACGCCTACTACGTGTGCAAGACTCTCATTTCCATGGTTTGTGAAGGAAGCGTTCCTTGCCTTGCTCTAGCTTACGTGGCGGACAATGTAACGGAAGGGCGTCGAGCTGCTGCATTTGGAATCCTTTCGGGGATTGGATCCGCTGCGTTCGTCTGCGGCACCTTATCAGCTCGTTTCCTATCTACTGCCCGAACTTTTCAGGTTTCTACTCTTGTCGCGGTGATCGGAGCGGTGTACATGAGAGTTTTTCTTCGGGATTCAATCATCGATCACAATCTTTCTGCTCCAATCAATTCACAAGCAAAACCCAAGACTGCTAAAATCGTTGCACTACCAAAAACAAATGTGCACGACTTTAAAACATTGCCTTCTTTAAAGGACTTAACCTCCTTGCTAAATAGTAGTTTGACTATTACCCAAGCAGCAATTGTTGCATTTTTCAGCAACCTTGCCGATATTGGCCTTCATGGTTCATTGATGTATTATTTGAAGGCTCGGTTTCATTTTGACAAGAAACAATTTGCTGACTTAATGCTCATTTCTGGGATTGCTGGGACTGTGTCACAGCTTCTTCTTATGCCCGTTCTGGCACCAACTTTGGGAGAGGCAAGGTTGCTTTCGATTGGACTTTTTTTCAGCTGTGTACATATGTTCATTTACAGCATTGCATGGTCCTCCTGGGTTCCTTATGCTGCTGCAATGTTCTCGATATTGTTTGTTTTCGCACAGCCTTGTATAAGAAGCCTTGTATCCAAACAAGTTGGTCCCTGTGAGCAGGGAAGGGCTCAGGGTTGCGTTTCAGGCATATGTTCATTTGCACATGTTGTTTCTCCATTGGCTTTCTCTCCCTTAACAGCTCTCTTCCTGTCTGAAACGGCACCTTTTAACTTTCCTGGCTTCAGTATAATGTGCATTGGATTTGCCTCGATGGTCTCTTTTGTTCAAAGTACTTTGATAAGAGGGGCTCCCCCCATTTTGAGTGACACGAACATAAATTGCTTGGAGCCCTAA 1323 0.4603 MDKFTGLSHLFMTVFLHNFSSFMVVPAITDVTMAALCPGQDECSLAIYLTAFHQAITGLGTLVTMPLLGNFSDMYGRKAVLTLPMTLAIIPLGILAYSRTQKFFYAYYVCKTLISMVCEGSVPCLALAYVADNVTEGRRAAAFGILSGIGSAAFVCGTLSARFLSTARTFQVSTLVAVIGAVYMRVFLRDSIIDHNLSAPINSQAKPKTAKIVALPKTNVHDFKTLPSLKDLTSLLNSSLTITQAAIVAFFSNLADIGLHGSLMYYLKARFHFDKKQFADLMLISGIAGTVSQLLLMPVLAPTLGEARLLSIGLFFSCVHMFIYSIAWSSWVPYAAAMFSILFVFAQPCIRSLVSKQVGPCEQGRAQGCVSGICSFAHVVSPLAFSPLTALFLSETAPFNFPGFSIMCIGFASMVSFVQSTLIRGAPPILSDTNINCLEP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0046 440 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 7 410 - -
Dere04g0046 440 Gene3D MFS general substrate transporter like domains 7 420 IPR036259 -
Dere04g0046 440 Pfam Major Facilitator Superfamily 10 382 IPR011701 GO:0022857|GO:0055085
Dere04g0046 440 CDD MFS_SLC46_TetA_like 10 420 - -
Dere04g0046 440 SUPERFAMILY MFS general substrate transporter 10 415 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0046 Dere-ChrDere04 576832 582473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0046 2 427 Organic Solute Cotransporters AT2G16990 46.119 1.11e-122 362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0046 04 576832 582473 Dere04g0046 04 576832 582473 ECH